3D54
Structure of PurLQS from Thermotoga maritima
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E | SCOP2B Superfamily | PurM C-terminal domain-like | 8042413 | 3000696 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | PurM N-terminal domain-like | 8042411 | 3001759 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | PurM N-terminal domain-like | 8042410 | 3001759 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | PurM C-terminal domain-like | 8042412 | 3000696 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | PurM N-terminal domain-like | 8042411 | 3001759 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | PurM C-terminal domain-like | 8042412 | 3000696 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | PurM N-terminal domain-like | 8042410 | 3001759 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | PurM C-terminal domain-like | 8042413 | 3000696 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PurM N-terminal domain-like | 8042410 | 3001759 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PurM C-terminal domain-like | 8042412 | 3000696 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PurM C-terminal domain-like | 8042413 | 3000696 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PurM N-terminal domain-like | 8042411 | 3001759 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E | PRK14090 | e3d54E1 | A: alpha arrays | X: RuvA-C | H: FGAM synthase PurL, linker domain (From Topology) | T: FGAM synthase PurL, linker domain | F: PRK14090 | ECOD (1.6) |
E | AIRS_C | e3d54E2 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: AIRS_C | ECOD (1.6) |
E | PurL_C | e3d54E3 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: PurL_C | ECOD (1.6) |
E | AIRS_1 | e3d54E4 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: PurM N-terminal domain-like (From Topology) | T: PurM N-terminal domain-like | F: AIRS_1 | ECOD (1.6) |
I | PRK14090 | e3d54I1 | A: alpha arrays | X: RuvA-C | H: FGAM synthase PurL, linker domain (From Topology) | T: FGAM synthase PurL, linker domain | F: PRK14090 | ECOD (1.6) |
I | AIRS_C | e3d54I2 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: AIRS_C | ECOD (1.6) |
I | PurL_C | e3d54I3 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: PurL_C | ECOD (1.6) |
I | AIRS_1 | e3d54I4 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: PurM N-terminal domain-like (From Topology) | T: PurM N-terminal domain-like | F: AIRS_1 | ECOD (1.6) |
A | PRK14090 | e3d54A1 | A: alpha arrays | X: RuvA-C | H: FGAM synthase PurL, linker domain (From Topology) | T: FGAM synthase PurL, linker domain | F: PRK14090 | ECOD (1.6) |
A | AIRS_C | e3d54A2 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: AIRS_C | ECOD (1.6) |
A | PurL_C | e3d54A3 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: PurL_C | ECOD (1.6) |
A | AIRS_1 | e3d54A4 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: PurM N-terminal domain-like (From Topology) | T: PurM N-terminal domain-like | F: AIRS_1 | ECOD (1.6) |
B | PurS | e3d54B1 | A: a+b two layers | X: Alpha-beta plaits | H: PurS-like (From Topology) | T: PurS-like | F: PurS | ECOD (1.6) |
G | PurS | e3d54G1 | A: a+b two layers | X: Alpha-beta plaits | H: PurS-like (From Topology) | T: PurS-like | F: PurS | ECOD (1.6) |
J | PurS | e3d54J1 | A: a+b two layers | X: Alpha-beta plaits | H: PurS-like (From Topology) | T: PurS-like | F: PurS | ECOD (1.6) |
K | PurS | e3d54K1 | A: a+b two layers | X: Alpha-beta plaits | H: PurS-like (From Topology) | T: PurS-like | F: PurS | ECOD (1.6) |
C | PurS | e3d54C1 | A: a+b two layers | X: Alpha-beta plaits | H: PurS-like (From Topology) | T: PurS-like | F: PurS | ECOD (1.6) |
F | PurS | e3d54F1 | A: a+b two layers | X: Alpha-beta plaits | H: PurS-like (From Topology) | T: PurS-like | F: PurS | ECOD (1.6) |
D | GATase_5 | e3d54D1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: GATase_5 | ECOD (1.6) |
H | GATase_5 | e3d54H1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: GATase_5 | ECOD (1.6) |
L | GATase_5 | e3d54L1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: GATase_5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02769 | AIR synthase related protein, C-terminal domain (AIRS_C) | AIR synthase related protein, C-terminal domain | This family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The function of the C-terminal domain of ... | Domain | |
PF16904 | Phosphoribosylformylglycinamidine synthase II C-terminus (PurL_C) | Phosphoribosylformylglycinamidine synthase II C-terminus | This is the C-terminal domain of phosphoribosylformylglycinamidine synthase II in Thermatoga and related species [1]. | Domain | |
PF18072 | Formylglycinamide ribonucleotide amidotransferase linker domain (FGAR-AT_linker) | Formylglycinamide ribonucleotide amidotransferase linker domain | This is the linker domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT), also known as Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3), PurL and formylglycinamidine ribonucleotide (FGAM) synthase. This enzyme catalyzes ... | Domain | |
PF00586 | AIR synthase related protein, N-terminal domain (AIRS) | AIR synthase related protein, N-terminal domain | This family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The N-terminal domain of AIR synthase fo ... | Domain | |
PF02700 | Phosphoribosylformylglycinamidine (FGAM) synthase (PurS) | Phosphoribosylformylglycinamidine (FGAM) synthase | - | Family | |
PF01965 | DJ-1/PfpI family (DJ-1_PfpI) | DJ-1/PfpI family | The family includes the protease PfpI Swiss:Q51732 [1]. This domain is also found in transcriptional regulators such as Swiss:Q9RJG8. | Domain | |
PF13507 | CobB/CobQ-like glutamine amidotransferase domain (GATase_5) | CobB/CobQ-like glutamine amidotransferase domain | This family captures members that are not found in Pfam:PF00310, Pfam:PF07685 and Pfam:PF13230. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041609 | Phosphoribosylformylglycinamidine synthase, linker domain | Domain | |
IPR036676 | PurM-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR010918 | PurM-like, C-terminal domain | Domain | |
IPR010074 | Phosphoribosylformylglycinamidine subunit PurL | Family | |
IPR031652 | Phosphoribosylformylglycinamidine subunit PurL, C-terminal | Domain | |
IPR038411 | PurL, C-terminal domain superfamily | Homologous Superfamily | |
IPR016188 | PurM-like, N-terminal domain | Domain | |
IPR036921 | PurM-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR036604 | Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily | Homologous Superfamily | |
IPR003850 | Phosphoribosylformylglycinamidine synthase subunit PurS | Family | |
IPR029062 | Class I glutamine amidotransferase-like | Homologous Superfamily | |
IPR010075 | Phosphoribosylformylglycinamidine synthase subunit PurQ | Family |