3CUQ
Integrated structural and functional model of the human ESCRT-II complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3cuqa1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EAP30_2nd | e3cuqA2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: EAP30_2nd | ECOD (1.6) |
A | EAP30_1st | e3cuqA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: EAP30_1st | ECOD (1.6) |
B | EAP30_2nd | e3cuqB4 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: EAP30_2nd | ECOD (1.6) |
B | EAP30_1st | e3cuqB3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: EAP30_1st | ECOD (1.6) |
C | ESCRT-II_C | e3cuqC1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: ESCRT-II_C | ECOD (1.6) |
C | ESCRT-II_N | e3cuqC2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: ESCRT-II_N | ECOD (1.6) |
D | ESCRT-II_N | e3cuqD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: ESCRT-II_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 6.10.140.260 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
C | 1.10.10.570 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | "Winged helix" DNA-binding domain. Chain C. Domain 1 | CATH (4.3.0) |
C | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
D | 1.10.10.570 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | "Winged helix" DNA-binding domain. Chain C. Domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05871 | ESCRT-II complex subunit (ESCRT-II) | ESCRT-II complex subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR016689 | ESCRT-2 complex, Snf8 | Family | |
IPR040608 | Snf8/Vps36 family | Family | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR040608 | Snf8/Vps36 family | Family | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR021648 | Vacuolar protein sorting protein 36, GLUE domain | Domain | |
IPR037855 | Vacuolar protein sorting protein 36 | Family | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR008570 | ESCRT-II complex, Vps25 subunit | Family | |
IPR014041 | ESCRT-II complex, Vps25 subunit, N-terminal winged helix | Homologous Superfamily |