3CJQ
Ribosomal protein L11 methyltransferase (PrmA) in complex with dimethylated ribosomal protein L11 in space group P212121
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8041051 | 3000118 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8041051 | 3000118 | SCOP2B (2022-06-29) |
E [auth G] | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8041051 | 3000118 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribosomal L11/L12e N-terminal domain-like | 8040122 | 3000950 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Ribosomal L11/L12e N-terminal domain-like | 8040122 | 3000950 | SCOP2B (2022-06-29) |
F [auth H] | SCOP2B Superfamily | Ribosomal L11/L12e N-terminal domain-like | 8040122 | 3000950 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | prmA_like | e3cjqA2 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain (From Topology) | T: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain | F: prmA_like | ECOD (1.6) |
A | Methyltransf_11_4 | e3cjqA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_11_4 | ECOD (1.6) |
C [auth D] | prmA_like | e3cjqD2 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain (From Topology) | T: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain | F: prmA_like | ECOD (1.6) |
C [auth D] | Methyltransf_11_4 | e3cjqD3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_11_4 | ECOD (1.6) |
E [auth G] | prmA_like | e3cjqG2 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain (From Topology) | T: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain | F: prmA_like | ECOD (1.6) |
E [auth G] | Methyltransf_11_4 | e3cjqG3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_11_4 | ECOD (1.6) |
B | Ribosomal_L11 | e3cjqB4 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: Ribosomal_L11 | ECOD (1.6) |
B | Ribosomal_L11_N | e3cjqB3 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: Ribosomal_L11_N | ECOD (1.6) |
D [auth E] | Ribosomal_L11 | e3cjqE4 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: Ribosomal_L11 | ECOD (1.6) |
D [auth E] | Ribosomal_L11_N | e3cjqE3 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: Ribosomal_L11_N | ECOD (1.6) |
F [auth H] | Ribosomal_L11 | e3cjqH4 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: Ribosomal_L11 | ECOD (1.6) |
F [auth H] | Ribosomal_L11_N | e3cjqH3 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: Ribosomal_L11_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth D], E [auth G] | PF06325 | Ribosomal protein L11 methyltransferase (PrmA) (PrmA) | Ribosomal protein L11 methyltransferase (PrmA) | - | Family |
B, D [auth E], F [auth H] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
B, D [auth E], F [auth H] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth D], E [auth G] | Ribosomal protein L11 methyltransferase | |||
B, D [auth E], F [auth H] | 50S ribosomal protein L11 |
|