Annotations: 3C6R

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	E set domains	8054979	3000070	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	E set domains	8054979	3000070	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	E set domains	8054979	3000070	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Flavi_glycop_C	e3c6rA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Flavi_glycop_C	ECOD (1.6)
A	Flavi_glycoprot	e3c6rA2	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Flavi_glycoprot	ECOD (1.6)
C [auth B]	Flavi_glycop_C	e3c6rB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Flavi_glycop_C	ECOD (1.6)
C [auth B]	Flavi_glycoprot	e3c6rB2	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Flavi_glycoprot	ECOD (1.6)
E [auth C]	Flavi_glycop_C	e3c6rC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Flavi_glycop_C	ECOD (1.6)
E [auth C]	Flavi_glycoprot	e3c6rC2	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Flavi_glycoprot	ECOD (1.6)
D [auth E]	Flavi_propep	e3c6rE1	A: beta sandwiches	X: HSP40/DnaJ peptide-binding domain (From Topology)	H: HSP40/DnaJ peptide-binding domain (From Topology)	T: HSP40/DnaJ peptide-binding domain	F: Flavi_propep	ECOD (1.6)
B [auth D]	Flavi_propep	e3c6rD1	A: beta sandwiches	X: HSP40/DnaJ peptide-binding domain (From Topology)	H: HSP40/DnaJ peptide-binding domain (From Topology)	T: HSP40/DnaJ peptide-binding domain	F: Flavi_propep	ECOD (1.6)
F	Flavi_propep	e3c6rF1	A: beta sandwiches	X: HSP40/DnaJ peptide-binding domain (From Topology)	H: HSP40/DnaJ peptide-binding domain (From Topology)	T: HSP40/DnaJ peptide-binding domain	F: Flavi_propep	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C [auth B], E [auth C]	PF00869	Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot)	Flavivirus glycoprotein, central and dimerisation domains	-	Domain
A, C [auth B], E [auth C]	PF02832	Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C)	Flavivirus glycoprotein, immunoglobulin-like domain	-	Domain
B [auth D], D [auth E], F	PF01570	Flavivirus polyprotein propeptide (Flavi_propep)	Flavivirus polyprotein propeptide	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C [auth B], E [auth C]	Envelope protein	protein binding binding protein dimerization activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell transport of virus virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host symbiont-mediated perturbation of host defense response response to host defenses response to stimulus response to other organism response to defenses of other organism modulation by virus of host process response to external stimulus virus-mediated perturbation of host defense response response to biotic stimulus symbiont-mediated perturbation of host process response to host response to external biotic stimulus modulation of process of another organism modulation by virus of host cellular process symbiont-mediated perturbation of host immune response symbiont-mediated perturbation of host defenses symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response response to host immune response symbiont-mediated suppression of host defenses symbiont-mediated perturbation of host innate immune response	membrane cellular anatomical entity virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part membrane cellular anatomical entity virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane viral membrane viral envelope viral nucleocapsid viral capsid
B [auth D], D [auth E], F	Peptide pr	protein binding binding protein dimerization activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell transport of virus virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host symbiont-mediated perturbation of host defense response response to host defenses response to stimulus response to other organism response to defenses of other organism modulation by virus of host process response to external stimulus virus-mediated perturbation of host defense response response to biotic stimulus symbiont-mediated perturbation of host process response to host response to external biotic stimulus modulation of process of another organism modulation by virus of host cellular process symbiont-mediated perturbation of host immune response symbiont-mediated perturbation of host defenses symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response response to host immune response symbiont-mediated suppression of host defenses symbiont-mediated perturbation of host innate immune response	membrane cellular anatomical entity virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part membrane cellular anatomical entity virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane viral membrane viral envelope viral nucleocapsid viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C [auth B], E [auth C]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
A, C [auth B], E [auth C]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, C [auth B], E [auth C]	IPR027287	Glycoprotein E, immunoglobulin-like domain, flavivirus	Domain
A, C [auth B], E [auth C]	IPR038302	Envelope glycoprotein M superfamily, flavivirus	Homologous Superfamily
A, C [auth B], E [auth C]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR000069	Envelope glycoprotein M, flavivirus	Domain
A, C [auth B], E [auth C]	IPR038345	Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR038688	Flavivirus polyprotein propeptide superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR026470	Flavivirus envelope glycoprotein E, Stem/Anchor domain	Domain
A, C [auth B], E [auth C]	IPR011998	Envelope glycoprotein E, central and dimerisation domain, flavivirus	Domain
A, C [auth B], E [auth C]	IPR013755	Flaviviral glycoprotein E, central domain, subdomain 1	Homologous Superfamily
A, C [auth B], E [auth C]	IPR013756	Flaviviral glycoprotein E, central domain, subdomain 2	Homologous Superfamily
A, C [auth B], E [auth C]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR002535	Flavivirus polyprotein propeptide	Domain
B [auth D], D [auth E], F	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
B [auth D], D [auth E], F	IPR014756	Immunoglobulin E-set	Homologous Superfamily
B [auth D], D [auth E], F	IPR027287	Glycoprotein E, immunoglobulin-like domain, flavivirus	Domain
B [auth D], D [auth E], F	IPR038302	Envelope glycoprotein M superfamily, flavivirus	Homologous Superfamily
B [auth D], D [auth E], F	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR000069	Envelope glycoprotein M, flavivirus	Domain
B [auth D], D [auth E], F	IPR038345	Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR038688	Flavivirus polyprotein propeptide superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR026470	Flavivirus envelope glycoprotein E, Stem/Anchor domain	Domain
B [auth D], D [auth E], F	IPR011998	Envelope glycoprotein E, central and dimerisation domain, flavivirus	Domain
B [auth D], D [auth E], F	IPR013755	Flaviviral glycoprotein E, central domain, subdomain 1	Homologous Superfamily
B [auth D], D [auth E], F	IPR013756	Flaviviral glycoprotein E, central domain, subdomain 2	Homologous Superfamily
B [auth D], D [auth E], F	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR002535	Flavivirus polyprotein propeptide	Domain