3C24
Crystal structure of a putative oxidoreductase (YP_511008.1) from Jannaschia sp. CCS1 at 1.62 A resolution
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8090783 | 3000048 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Ketol-acid reductoisomerase (KARI)-like | 8046324 | 4000106 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | 6-phosphogluconate dehydrogenase-like | 8090783 | 3000048 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PGDH_C_2nd | e3c24A2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PGDH_C_2nd | ECOD (1.6) |
A | PGDH_C_1st | e3c24A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PGDH_C_1st | ECOD (1.6) |
B | PGDH_C_2nd | e3c24B4 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PGDH_C_2nd | ECOD (1.6) |
B | PGDH_C_1st | e3c24B3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PGDH_C_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
A | 1.10.3640.10 | Mainly Alpha | Orthogonal Bundle | putative oxidoreductase fold | Semialdehyde dehydrogenase-like, C-terminal | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 1.10.3640.10 | Mainly Alpha | Orthogonal Bundle | putative oxidoreductase fold | Semialdehyde dehydrogenase-like, C-terminal | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03807 | NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) | NADP oxidoreductase coenzyme F420-dependent | - | Family | |
PF16896 | Phosphogluconate dehydrogenase (decarboxylating) C-term (PGDH_C) | Phosphogluconate dehydrogenase (decarboxylating) C-term | PGDH_C is the C-terminal domain of putative bacterial phosphogluconate dehydrogenase proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Putative oxidoreductase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR050812 | Prephenate/Arogenate Dehydrogenase | Family | |
IPR031663 | Phosphogluconate dehydrogenase (decarboxylating) , C-terminal | Domain | |
IPR037161 | Semialdehyde dehydrogenase-like, C-terminal | Homologous Superfamily | |
IPR028939 | Pyrroline-5-carboxylate reductase, catalytic, N-terminal | Domain |