Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyChorismate lyase-like 8002709 3000072 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWinged helix DNA-binding domain 8017598 3000034 SCOP2B (2022-06-29)
BSCOP2 FamilyGntR-like transcriptional regulators 8002705 4000155 SCOP2 (2022-06-29)
BSCOP2 FamilyUTRA domain 8002707 4000314 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyWinged helix DNA-binding domain 8017598 3000034 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyChorismate lyase-like 8002709 3000072 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyWinged helix DNA-binding domain 8017598 3000034 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyChorismate lyase-like 8002709 3000072 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGntRe3bwgA1 A: alpha arraysX: HTHH: HTHT: wingedF: GntRECOD (1.6)
AUTRAe3bwgA2 A: a+b two layersX: Chorismate lyase (From Topology)H: Chorismate lyase (From Topology)T: Chorismate lyaseF: UTRAECOD (1.6)
BGntRe3bwgB1 A: alpha arraysX: HTHH: HTHT: wingedF: GntRECOD (1.6)
BUTRAe3bwgB2 A: a+b two layersX: Chorismate lyase (From Topology)H: Chorismate lyase (From Topology)T: Chorismate lyaseF: UTRAECOD (1.6)
CGntRe3bwgC1 A: alpha arraysX: HTHH: HTHT: wingedF: GntRECOD (1.6)
CUTRAe3bwgC2 A: a+b two layersX: Chorismate lyase (From Topology)H: Chorismate lyase (From Topology)T: Chorismate lyaseF: UTRAECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00392Bacterial regulatory proteins, gntR family (GntR)Bacterial regulatory proteins, gntR familyThis family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins include the following sub-fam ...This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR [1-2][4][5]. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships [3]. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor [5].
Domain
A, B, C
PF07702UTRA domain (UTRA)UTRA domainThe UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to Pfam:PF04345 [1]. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules ...The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to Pfam:PF04345 [1]. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules [1] sugar phosphates and urocanate, Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Uncharacterized HTH-type transcriptional regulator yydK -