3B7Q
Crystal Structure of Yeast Sec14 Homolog Sfh1 in Complex with Phosphatidylcholine
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3b7qb1 | All alpha proteins | RuvA C-terminal domain-like | CRAL/TRIO N-terminal domain | automated matches | automated matches | baker's yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
B | d3b7qb2 | Alpha and beta proteins (a/b) | SpoIIaa-like | CRAL/TRIO domain | automated matches | automated matches | baker's yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
A | d3b7qa1 | All alpha proteins | RuvA C-terminal domain-like | CRAL/TRIO N-terminal domain | automated matches | automated matches | baker's yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
A | d3b7qa2 | Alpha and beta proteins (a/b) | SpoIIaa-like | CRAL/TRIO domain | automated matches | automated matches | baker's yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | CRAL_TRIO_N | e3b7qB1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: CRAL_TRIO_N | ECOD (1.6) |
B | CRAL_TRIO | e3b7qB2 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: CRAL_TRIO | ECOD (1.6) |
A | CRAL_TRIO_N | e3b7qA1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: CRAL_TRIO_N | ECOD (1.6) |
A | CRAL_TRIO | e3b7qA2 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: CRAL_TRIO | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.8.20 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
B | 3.40.525.10 | Alpha Beta | 3-Layer(aba) Sandwich | Phosphatidylinositol Transfer Protein Sec14p | CRAL-TRIO lipid binding domain | CATH (4.3.0) |
A | 1.10.8.20 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
A | 3.40.525.10 | Alpha Beta | 3-Layer(aba) Sandwich | Phosphatidylinositol Transfer Protein Sec14p | CRAL-TRIO lipid binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00650 | CRAL/TRIO domain (CRAL_TRIO) | CRAL/TRIO domain | - | Domain | |
PF03765 | CRAL/TRIO, N-terminal domain (CRAL_TRIO_N) | CRAL/TRIO, N-terminal domain | This all-alpha domain is found to the N-terminus of Pfam:PF00650. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Uncharacterized protein YKL091C | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001251 | CRAL-TRIO lipid binding domain | Domain | |
IPR011074 | CRAL/TRIO, N-terminal domain | Domain | |
IPR036865 | CRAL-TRIO lipid binding domain superfamily | Homologous Superfamily | |
IPR051026 | Phosphatidylinositol/phosphatidylcholine transfer | Family | |
IPR036273 | CRAL/TRIO, N-terminal domain superfamily | Homologous Superfamily |