3AU5
Structure of the human myosin-X MyTH4-FERM cassette
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Ubiquitin-like | 8091829 | 3000157 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | MyTH4 domain-like | 8091827 | 3002546 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PH domain-like | 8091831 | 3000134 | SCOP2B (2022-06-29) |
A | SCOP2 Family | MyTH4 domain-like | 8048248 | 4006026 | SCOP2 (2022-06-29) |
A | SCOP2 Family | FERM domain-like | 8091828 | 4000747 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MyTH4 domain-like | 8091827 | 3002546 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | FERM central domain-like | 8091830 | 3001227 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ubiquitin-like | 8091829 | 3000157 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PH domain-like | 8091831 | 3000134 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | FERM_C1_MyoVII | e3au5B4 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: FERM_C1_MyoVII | ECOD (1.6) |
B | FERM_M | e3au5B7 | A: alpha bundles | X: Acyl-CoA binding protein-like (From Topology) | H: Acyl-CoA binding protein-like (From Topology) | T: Acyl-CoA binding protein-like | F: FERM_M | ECOD (1.6) |
B | MyTH4 | e3au5B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: MyTH4 | ECOD (1.6) |
B | RA_2 | e3au5B8 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RA_2 | ECOD (1.6) |
A | FERM_C1_MyoVII | e3au5A9 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: FERM_C1_MyoVII | ECOD (1.6) |
A | FERM_M | e3au5A7 | A: alpha bundles | X: Acyl-CoA binding protein-like (From Topology) | H: Acyl-CoA binding protein-like (From Topology) | T: Acyl-CoA binding protein-like | F: FERM_M | ECOD (1.6) |
A | MyTH4 | e3au5A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: MyTH4 | ECOD (1.6) |
A | RA_2 | e3au5A8 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RA_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.25.40.530 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | MyTH4 domain | CATH (4.3.0) |
B | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
B | 1.20.80.10 | Mainly Alpha | Up-down Bundle | Acyl-CoA Binding Protein | CATH (4.3.0) | |
B | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
A | 1.25.40.530 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | MyTH4 domain | CATH (4.3.0) |
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
A | 1.20.80.10 | Mainly Alpha | Up-down Bundle | Acyl-CoA Binding Protein | CATH (4.3.0) | |
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00788 | Ras association (RalGDS/AF-6) domain (RA) | Ras association (RalGDS/AF-6) domain | RasGTP effectors (in cases of AF6, canoe and RalGDS); putative RasGTP effectors in other cases. Recent evidence (not yet in MEDLINE) shows that some RA domains do NOT bind RasGTP. Predicted structure [3] similar to that determined [1], and that of th ... | Domain | |
PF21989 | RA like domain (RA_2) | RA like domain | - | Domain | |
PF00373 | FERM central domain (FERM_M) | FERM central domain | This domain is the central structural domain of the FERM domain. | Domain | |
PF00784 | MyTH4 domain (MyTH4) | MyTH4 domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR000299 | FERM domain | Domain | |
IPR001849 | Pleckstrin homology domain | Domain | |
IPR036124 | Class X myosin, motor domain | Domain | |
IPR014352 | FERM/acyl-CoA-binding protein superfamily | Homologous Superfamily | |
IPR019748 | FERM central domain | Domain | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR000048 | IQ motif, EF-hand binding site | Binding Site | |
IPR038185 | MyTH4 domain superfamily | Homologous Superfamily | |
IPR031971 | Unconventional myosin-X, coiled coil domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR019749 | Band 4.1 domain | Domain | |
IPR000159 | Ras-associating domain | Domain | |
IPR035963 | FERM superfamily, second domain | Homologous Superfamily | |
IPR051724 | Actin-based Motor Myosin | Family | |
IPR041797 | Myosin X, FERM domain C-lobe | Domain | |
IPR000857 | MyTH4 domain | Domain | |
IPR001609 | Myosin head, motor domain | Domain | |
IPR040640 | Myosin X, N-terminal SH3 domain | Domain |