3ACF

Crystal Structure of Carbohydrate-Binding Module Family 28 from Clostridium josui Cel5A in a ligand-free form

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3acfa_	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Ruminiclostridium josui ) [TaxId: 1499 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Family 28 carbohydrate binding module cbm28	8072755	4001715	SCOP2 (2021-05-27)
A	SCOP2 Superfamily	galactose-binding domain-like	8072756	3000087	SCOP2 (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF03424	e3acfA1	A: beta sandwiches	X: jelly-roll	H: Galactose-binding domain-like (From Topology)	T: Galactose-binding domain-like	F: PF03424	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF03424	Carbohydrate binding domain (family 17/28) (CBM_17_28)	Carbohydrate binding domain (family 17/28)	This entry represents two tandem carbohydrate binding domains from CBM17 and CBM28 families. CBM17 binds to amorphous cellulose and soluble beta-1,4-glucans. CBM28 does not compete with CBM17 modules when binding to non-crystalline cellulose and it i ...	This entry represents two tandem carbohydrate binding domains from CBM17 and CBM28 families. CBM17 binds to amorphous cellulose and soluble beta-1,4-glucans. CBM28 does not compete with CBM17 modules when binding to non-crystalline cellulose and it is closely related to CBM17, according to sequence and structural conservation which suggests that they have evolved through gene duplication and subsequent divergence.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Beta-1,4-endoglucanase	hydrolase activity, acting on glycosyl bonds cellulase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process catabolic process glucan catabolic process beta-glucan metabolic process carbohydrate catabolic process primary metabolic process macromolecule catabolic process polysaccharide metabolic process glucan metabolic process beta-glucan catabolic process polysaccharide catabolic process metabolic process cellulose catabolic process macromolecule metabolic process carbohydrate metabolic process catabolic process glucan catabolic process beta-glucan metabolic process carbohydrate catabolic process primary metabolic process macromolecule catabolic process polysaccharide metabolic process glucan metabolic process beta-glucan catabolic process polysaccharide catabolic process metabolic process cellulose catabolic process macromolecule metabolic process cellulose metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR005086	Carbohydrate binding module family 17/28	Domain
A	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A	IPR001547	Glycoside hydrolase, family 5	Domain
A	IPR018087	Glycoside hydrolase, family 5, conserved site	Conserved Site
A	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A	IPR001119	S-layer homology domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.