Crystal structure of the earthworm R-type lectin C-half in complex with Lactose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2zqna_ | All beta proteins | beta-Trefoil | Ricin B-like lectins | Ricin B-like | 29-kDa galactose-binding lectin | Common earthworm (Lumbricus terrestris ) [TaxId: 6398 ], | SCOPe (2.08) |
| B | d2zqnb_ | All beta proteins | beta-Trefoil | Ricin B-like lectins | Ricin B-like | 29-kDa galactose-binding lectin | Common earthworm (Lumbricus terrestris ) [TaxId: 6398 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | RicinB_lectin_2 | e2zqnA1 | A: beta duplicates or obligate multimers | X: beta-Trefoil | H: beta-Trefoil | T: beta-Trefoil | F: RicinB_lectin_2 | ECOD (v295.2) |
| B | Ldl_recept_b | e2zqnB1 | A: alpha arrays | X: Phage tail fiber protein trimerization domain | H: Phage tail fiber protein trimerization domain | T: Phage tail fiber protein trimerization domain | F: Ldl_recept_b | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| B | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
| IPR000772 | Ricin B, lectin domain | Domain |
