2ZOD
Crystal structure of selenophosphate synthetase from Aquifex aeolicus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2zoda1 | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | PurM N-terminal domain-like | PurM N-terminal domain-like | Selenide, water dikinase SelD | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
A | d2zoda2 | Alpha and beta proteins (a+b) | PurM C-terminal domain-like | PurM C-terminal domain-like | PurM C-terminal domain-like | Selenide, water dikinase SelD | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
B | d2zodb1 | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | PurM N-terminal domain-like | PurM N-terminal domain-like | Selenide, water dikinase SelD | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
B | d2zodb2 | Alpha and beta proteins (a+b) | PurM C-terminal domain-like | PurM C-terminal domain-like | PurM C-terminal domain-like | Selenide, water dikinase SelD | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PurM C-terminal domain-like | 8037956 | 3000696 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PurM N-terminal domain-like | 8037954 | 3001759 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PurM C-terminal domain-like | 8037956 | 3000696 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PurM N-terminal domain-like | 8037954 | 3001759 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AIRS_C | e2zodA1 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: AIRS_C | ECOD (1.6) |
A | AIRS | e2zodA2 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: PurM N-terminal domain-like (From Topology) | T: PurM N-terminal domain-like | F: AIRS | ECOD (1.6) |
B | AIRS_C | e2zodB1 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: AIRS_C | ECOD (1.6) |
B | AIRS | e2zodB2 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: PurM N-terminal domain-like (From Topology) | T: PurM N-terminal domain-like | F: AIRS | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1330.10 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
A | 3.90.650.10 | Alpha Beta | Alpha-Beta Complex | Phosphoribosyl-aminoimidazole Synthetase | Chain A, domain 2 | CATH (4.3.0) |
B | 3.30.1330.10 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
B | 3.90.650.10 | Alpha Beta | Alpha-Beta Complex | Phosphoribosyl-aminoimidazole Synthetase | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02769 | AIR synthase related protein, C-terminal domain (AIRS_C) | AIR synthase related protein, C-terminal domain | This family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The function of the C-terminal domain of ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036676 | PurM-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR004536 | Selenophosphate synthetase | Family | |
IPR010918 | PurM-like, C-terminal domain | Domain | |
IPR023061 | Selenophosphate synthetase, class I | Family | |
IPR016188 | PurM-like, N-terminal domain | Domain | |
IPR036921 | PurM-like, N-terminal domain superfamily | Homologous Superfamily |