2ZNX
5-Fluorotryptophan Incorporated ScFv10 Complexed to Hen Egg Lysozyme
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth Y] | SCOP2B Superfamily | Lysozyme-like | 8037428 | 3001879 | SCOP2B (2022-06-29) |
D [auth Z] | SCOP2B Superfamily | Lysozyme-like | 8037428 | 3001879 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | V-set_8 | e2znxA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
A | V-set | e2znxA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
C [auth B] | V-set_8 | e2znxB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
C [auth B] | V-set | e2znxB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
B [auth Y] | Lys | e2znxY1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Lys | ECOD (1.6) |
D [auth Z] | Lys | e2znxZ1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Lys | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B [auth Y] | 1.10.530.10 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
D [auth Z] | 1.10.530.10 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A, C [auth B] | 5-Fluorotryptophan ScFv10 Complex | SCFV-KAPPA-HEAVY | Mus musculus (house mouse) | IGKV5-43*01, IGKJ2*01, IGHV3-8*02, IGHV3S1*01, IGHJ3*01 | V-DOMAIN V-KAPPA, V-DOMAIN VH | IG | SCFV-KAPPA-HEAVY | IMGT (202433-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
B [auth Y], D [auth Z] | PF00062 | C-type lysozyme/alpha-lactalbumin family (Lys) | C-type lysozyme/alpha-lactalbumin family | Alpha-lactalbumin is the regulatory subunit of lactose synthase, changing the substrate specificity of galactosyltransferase from N-acetylglucosamine to glucose. C-type lysozymes are secreted bacteriolytic enzymes that cleave the peptidoglycan of bac ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR050199 | Immunoglobulin Heavy Variable | Family |
A, C [auth B] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A, C [auth B] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
A, C [auth B] | IPR003598 | Immunoglobulin subtype 2 | Domain |
A, C [auth B] | IPR013106 | Immunoglobulin V-set domain | Domain |
A, C [auth B] | IPR003599 | Immunoglobulin domain subtype | Domain |
A, C [auth B] | IPR007110 | Immunoglobulin-like domain | Domain |
B [auth Y], D [auth Z] | IPR001916 | Glycoside hydrolase, family 22 | Family |
B [auth Y], D [auth Z] | IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily |
B [auth Y], D [auth Z] | IPR019799 | Glycoside hydrolase family 22 domain | Domain |
B [auth Y], D [auth Z] | IPR000974 | Glycoside hydrolase, family 22, lysozyme | Family |