2ZKO
Structural basis for dsRNA recognition by NS1 protein of human influenza virus A
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth B] | d2zkob_ | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | N-terminal, RNA-binding domain of nonstructural protein NS1 | automated matches | (Influenza A virus ) [TaxId: 11320 ], | SCOPe (2.08) |
C [auth A] | d2zkoa_ | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | N-terminal, RNA-binding domain of nonstructural protein NS1 | automated matches | (Influenza A virus ) [TaxId: 11320 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth B] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8071726 | 3001284 | SCOP2B (2021-05-27) |
C [auth A] | SCOP2 Family | N-terminal RNA-binding domain of nonstructural protein NS1 | 8071725 | 4000764 | SCOP2 (2021-05-27) |
C [auth A] | SCOP2 Superfamily | S15/NS1 RNA-binding domain | 8071726 | 3001284 | SCOP2 (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth B] | PF00600 | e2zkoB1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00600 | ECOD (1.6) |
C [auth A] | PF00600 | e2zkoA1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00600 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D [auth B] | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
C [auth A] | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF00600 | Influenza non-structural protein (NS1) (Flu_NS1) | Influenza non-structural protein (NS1) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR000256 | Influenza A virus NS1 protein | Family |
C [auth A], D [auth B] | IPR004208 | Influenza non-structural protein (NS1) | Family |