2ZKG
Crystal structure of unliganded SRA domain of mouse Np95
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2zkga_ | All beta proteins | PUA domain-like | PUA domain-like | SRA domain-like | E3 ubiquitin-protein ligase UHRF1 | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d2zkgb_ | All beta proteins | PUA domain-like | PUA domain-like | SRA domain-like | E3 ubiquitin-protein ligase UHRF1 | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
D | d2zkgd_ | All beta proteins | PUA domain-like | PUA domain-like | SRA domain-like | E3 ubiquitin-protein ligase UHRF1 | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
C | d2zkgc_ | All beta proteins | PUA domain-like | PUA domain-like | SRA domain-like | E3 ubiquitin-protein ligase UHRF1 | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PUA domain-like | 8038600 | 3001015 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PUA domain-like | 8038600 | 3001015 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PUA domain-like | 8038600 | 3001015 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PUA domain-like | 8038600 | 3001015 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SAD_SRA | e2zkgA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: SAD_SRA | ECOD (1.6) |
B | SAD_SRA | e2zkgB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: SAD_SRA | ECOD (1.6) |
D | SAD_SRA | e2zkgD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: SAD_SRA | ECOD (1.6) |
C | SAD_SRA | e2zkgC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: SAD_SRA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.280.10 | Mainly Beta | Roll | PUA domain-like | SRA-YDG | CATH (4.3.0) |
B | 2.30.280.10 | Mainly Beta | Roll | PUA domain-like | SRA-YDG | CATH (4.3.0) |
D | 2.30.280.10 | Mainly Beta | Roll | PUA domain-like | SRA-YDG | CATH (4.3.0) |
C | 2.30.280.10 | Mainly Beta | Roll | PUA domain-like | SRA-YDG | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02182 | SAD/SRA domain (SAD_SRA) | SAD/SRA domain | The domain goes by several names including SAD [1], SRA [2] and YDG [3]. It adopts a beta barrel, modified PUA-like, fold that is widely present in eukaryotic chromatin proteins and in bacteria [4]. Versions of this domain are known to bind hemi-m ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015947 | PUA-like superfamily | Homologous Superfamily | |
IPR001965 | Zinc finger, PHD-type | Domain | |
IPR003105 | SRA-YDG | Domain | |
IPR019787 | Zinc finger, PHD-finger | Domain | |
IPR047406 | E3 ubiquitin-protein ligase UHRF1, ubiquitin-like domain | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR021991 | UHRF1, tandem tudor domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR045134 | UHRF1/2-like | Family | |
IPR001841 | Zinc finger, RING-type | Domain | |
IPR036987 | SRA-YDG superfamily | Homologous Superfamily |