2YYB
Crystal structure of TTHA1606 from Thermus thermophilus HB8
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2yyba_ | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | automated matches | automated matches | (Thermus thermophilus HB8 ) [TaxId: 300852 ], | SCOPe (2.08) |
B | d2yybb_ | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | automated matches | automated matches | (Thermus thermophilus HB8 ) [TaxId: 300852 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | NIF3_1st | e2yybA2 | A: a/b three-layered sandwiches | X: NIF3 (NGG1p interacting factor 3)-like (From Topology) | H: NIF3 (NGG1p interacting factor 3)-like (From Topology) | T: NIF3 (NGG1p interacting factor 3)-like | F: NIF3_1st | ECOD (1.6) |
B | NIF3_1st | e2yybB1 | A: a/b three-layered sandwiches | X: NIF3 (NGG1p interacting factor 3)-like (From Topology) | H: NIF3 (NGG1p interacting factor 3)-like (From Topology) | T: NIF3 (NGG1p interacting factor 3)-like | F: NIF3_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase | Chain: A, domain 1 | CATH (4.3.0) |
B | 3.40.1390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01784 | Duf34/NIF3 (NGG1p interacting factor 3) (DUF34_NIF3) | Duf34/NIF3 (NGG1p interacting factor 3) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Hypothetical protein TTHA1606 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002678 | DUF34/NIF3 | Family | |
IPR036069 | DUF34/NIF3 superfamily | Homologous Superfamily |