2YVV
Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2yvva1 | All beta proteins | Triple-stranded beta-helix | Phage fibre proteins | HylP-like | Phage-associated hyaluronidase, HylP1 | (Streptococcus pyogenes ) [TaxId: 1314 ], | SCOPe (2.08) |
A | d2yvva2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Streptococcus pyogenes ) [TaxId: 1314 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hyaluronidase_1 | e2yvvA1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Hyaluronidase_1 | ECOD (1.6) |
A | EUF07876 | e2yvvA2 | A: beta duplicates or obligate multimers | X: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | H: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | T: Major tropism determinant (Mtd) trimerization domain-related | F: EUF07876 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18454 | Major tropism determinant N-terminal domain (Mtd_N) | Major tropism determinant N-terminal domain | This is the N-terminal domain of major tropism determinant (Mtd), a retroelement-encoded receptor-binding protein. Mtd-N forms a three-fold symmetric beta-prism. This resembles the pseudo three-fold-symmetric beta-prisms of monocot lectins, but lacks ... | Domain | |
PF07212 | Hyaluronidase protein (HylP) (Hyaluronidase_1) | Hyaluronidase protein (HylP) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009860 | Hyaluronidase, bacterial | Family | |
IPR041352 | Major tropism determinant, N-terminal domain | Domain |