Annotations: 2YMZ

Crystal structure of chicken Galectin 2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2ymzf1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
F	d2ymzf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
E	d2ymze1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
E	d2ymze2	Artifacts	Tags	Tags	Tags	N-terminal Tags	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
D	d2ymzd1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
D	d2ymzd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
C	d2ymzc1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
C	d2ymzc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
B	d2ymzb1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
B	d2ymzb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
A	d2ymza1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
A	d2ymza2	Artifacts	Tags	Tags	Tags	N-terminal Tags	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8072469	3000120	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8072469	3000120	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8072469	3000120	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8072469	3000120	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8072469	3000120	SCOP2B (2022-06-29)
A	SCOP2 Family	Galectin (animal S-lectin)	8072468	4002674	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Concanavalin A-like lectins/glucanases	8072469	3000120	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F		e2ymzF1	A: beta barrels	X: PRTase-like	H: PRTase-like	T: PRTase-like	F:	ECOD (v294.2)
E		e2ymzE1	A: beta barrels	X: PRTase-like	H: PRTase-like	T: PRTase-like	F:	ECOD (v294.2)
D		e2ymzD1	A: beta barrels	X: PRTase-like	H: PRTase-like	T: PRTase-like	F:	ECOD (v294.2)
C		e2ymzC1	A: beta barrels	X: PRTase-like	H: PRTase-like	T: PRTase-like	F:	ECOD (v294.2)
B		e2ymzB1	A: beta barrels	X: PRTase-like	H: PRTase-like	T: PRTase-like	F:	ECOD (v294.2)
A		e2ymzA1	A: beta barrels	X: PRTase-like	H: PRTase-like	T: PRTase-like	F:	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
E	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
D	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
A	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF00337	Galactoside-binding lectin (Gal-bind_lectin)	Galactoside-binding lectin	This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (Swiss:Q05315, EC:3.1.1.5).	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	GALECTIN 2	binding carbohydrate binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR044156	Galectin-like	Family
A, B, C, D, E A, B, C, D, E, F	IPR001079	Galectin, carbohydrate recognition domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.