Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPhospholipase D/nuclease-like 8092078 3000664 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhospholipase D/nuclease-like 8092078 3000664 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPhospholipase D/nuclease-like 8092078 3000664 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMIT domain 8067094 3001898 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMIT domain 8067094 3001898 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPhospholipase D/nuclease-like 8092078 3000664 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMIT_Ce2ymbA1 A: a+b three layersX: Phospholipase D/nuclease (From Topology)H: Phospholipase D/nuclease (From Topology)T: Phospholipase D/nucleaseF: MIT_CECOD (1.6)
BMIT_Ce2ymbB1 A: a+b three layersX: Phospholipase D/nuclease (From Topology)H: Phospholipase D/nuclease (From Topology)T: Phospholipase D/nucleaseF: MIT_CECOD (1.6)
CMITe2ymbC2 A: alpha bundlesX: Spectrin repeat-likeH: MIT domain (From Topology)T: MIT domainF: MITECOD (1.6)
CMIT_Ce2ymbC1 A: a+b three layersX: Phospholipase D/nuclease (From Topology)H: Phospholipase D/nuclease (From Topology)T: Phospholipase D/nucleaseF: MIT_CECOD (1.6)
DMITe2ymbD2 A: alpha bundlesX: Spectrin repeat-likeH: MIT domain (From Topology)T: MIT domainF: MITECOD (1.6)
DMIT_Ce2ymbD1 A: a+b three layersX: Phospholipase D/nuclease (From Topology)H: Phospholipase D/nuclease (From Topology)T: Phospholipase D/nucleaseF: MIT_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.870.30 Alpha Beta 2-Layer Sandwich Endonuclease Chain ACATH (4.3.0)
B3.30.870.30 Alpha Beta 2-Layer Sandwich Endonuclease Chain ACATH (4.3.0)
C1.20.58.80 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
C3.30.870.30 Alpha Beta 2-Layer Sandwich Endonuclease Chain ACATH (4.3.0)
D1.20.58.80 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
D3.30.870.30 Alpha Beta 2-Layer Sandwich Endonuclease Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF16565Phospholipase D-like domain at C-terminus of MIT (MIT_C)Phospholipase D-like domain at C-terminus of MITMIT_C is the C-terminal domain of MIT-containing proteins, Pfam:PF04212. It contains an unanticipated phospholipase d fold (PLD fold) that binds avidly to phosphoinositide-containing membranes [1]. It is conserved in eukaryotes, though not fungi and ...MIT_C is the C-terminal domain of MIT-containing proteins, Pfam:PF04212. It contains an unanticipated phospholipase d fold (PLD fold) that binds avidly to phosphoinositide-containing membranes [1]. It is conserved in eukaryotes, though not fungi and plants, and some bacteria.
Domain
A, B, C, D
PF04212MIT (microtubule interacting and transport) domain (MIT)MIT (microtubule interacting and transport) domainThe MIT domain forms an asymmetric three-helix bundle [3] and binds ESCRT-III (endosomal sorting complexes required for transport) substrates [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
MIT DOMAIN-CONTAINING PROTEIN 1
E [auth F],
F [auth H]
CHARGED MULTIVESICULAR BODY PROTEIN 1A