2Y4Z
Structure of the amino-terminal capsid restriction escape mutation N- MLV L10W
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2y4za1 | All alpha proteins | Retrovirus capsid protein, N-terminal core domain | Retrovirus capsid protein, N-terminal core domain | Retrovirus capsid protein, N-terminal core domain | automated matches | (Murine leukemia virus ) [TaxId: 11786 ], | SCOPe (2.08) |
A | d2y4za2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Murine leukemia virus ) [TaxId: 11786 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Gag_p30 | e2y4zA1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Gag_p30 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.375.10 | Mainly Alpha | Orthogonal Bundle | Human Immunodeficiency Virus Type 1 Capsid Protein | Human Immunodeficiency Virus Type 1 Capsid Protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02093 | Gag P30 core shell protein (Gag_p30) | Gag P30 core shell protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050462 | Retroviral Gag-Pol polyproteins | Family | |
IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily | |
IPR000840 | Gamma-retroviral matrix protein | Domain | |
IPR001878 | Zinc finger, CCHC-type | Domain | |
IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily | |
IPR010999 | Retroviral matrix protein | Homologous Superfamily | |
IPR036946 | Gamma-retroviral matrix domain superfamily | Homologous Superfamily | |
IPR002079 | Gag polyprotein, inner coat protein p12 | Domain | |
IPR003036 | Core shell protein Gag P30 | Domain |