2XI1
Crystal structure of the HIV-1 Nef sequenced from a patient's sample
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00469 | e2xi1A1 | A: a+b three layers | X: Regulatory factor Nef (From Topology) | H: Regulatory factor Nef (From Topology) | T: Regulatory factor Nef | F: PF00469 | ECOD (1.6) |
B | PF00469 | e2xi1B1 | A: a+b three layers | X: Regulatory factor Nef (From Topology) | H: Regulatory factor Nef (From Topology) | T: Regulatory factor Nef | F: PF00469 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.62.10 | Alpha Beta | 2-Layer Sandwich | Nef Regulatory Factor | Nef Regulatory Factor | CATH (4.2.0) |
B | 3.30.62.10 | Alpha Beta | 2-Layer Sandwich | Nef Regulatory Factor | Nef Regulatory Factor | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001558 | HIV negative factor Nef | Family | |
IPR027480 | HIV-1 Nef protein, anchor domain superfamily | Homologous Superfamily | |
IPR027481 | HIV-1 Nef protein, core domain superfamily | Homologous Superfamily | |
IPR001558 | HIV negative factor Nef | Family | |
IPR027480 | HIV-1 Nef protein, anchor domain superfamily | Homologous Superfamily | |
IPR027481 | HIV-1 Nef protein, core domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Negative factor (Nef) protein |