2XC1
Full-length Tailspike Protein Mutant Y108W of Bacteriophage P22
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Pectin lyase-like | 8042982 | 3001746 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Head-binding domain of phage P22 tailspike protein | 8043159 | 3002008 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Pectin lyase-like | 8042982 | 3001746 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Head-binding domain of phage P22 tailspike protein | 8043159 | 3002008 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Pectin lyase-like | 8042982 | 3001746 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Head-binding domain of phage P22 tailspike protein | 8043159 | 3002008 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Head_binding | e2xc1A2 | A: beta sandwiches | X: Head-binding domain of phage P22 tailspike protein (From Topology) | H: Head-binding domain of phage P22 tailspike protein (From Topology) | T: Head-binding domain of phage P22 tailspike protein | F: Head_binding | ECOD (1.6) |
A | PhageP22-tail_N | e2xc1A3 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: PhageP22-tail_N | ECOD (1.6) |
A | PhageP22-tail_C | e2xc1A4 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: PhageP22-tail_C | ECOD (1.6) |
C | Head_binding | e2xc1C1 | A: beta sandwiches | X: Head-binding domain of phage P22 tailspike protein (From Topology) | H: Head-binding domain of phage P22 tailspike protein (From Topology) | T: Head-binding domain of phage P22 tailspike protein | F: Head_binding | ECOD (1.6) |
C | PhageP22-tail_N | e2xc1C2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: PhageP22-tail_N | ECOD (1.6) |
C | PhageP22-tail_C | e2xc1C3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: PhageP22-tail_C | ECOD (1.6) |
B | Head_binding | e2xc1B1 | A: beta sandwiches | X: Head-binding domain of phage P22 tailspike protein (From Topology) | H: Head-binding domain of phage P22 tailspike protein (From Topology) | T: Head-binding domain of phage P22 tailspike protein | F: Head_binding | ECOD (1.6) |
B | PhageP22-tail_N | e2xc1B2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: PhageP22-tail_N | ECOD (1.6) |
B | PhageP22-tail_C | e2xc1B3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: PhageP22-tail_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.14.10 | Mainly Beta | Beta Complex | Tailspike Protein | Chain | CATH (4.3.0) |
A | 2.160.20.20 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | CATH (4.3.0) | |
C | 2.170.14.10 | Mainly Beta | Beta Complex | Tailspike Protein | Chain | CATH (4.3.0) |
C | 2.160.20.20 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | CATH (4.3.0) | |
B | 2.170.14.10 | Mainly Beta | Beta Complex | Tailspike Protein | Chain | CATH (4.3.0) |
B | 2.160.20.20 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09251 | Salmonella phage P22 tail-spike (PhageP22-tail) | Salmonella phage P22 tail-spike | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012332 | Autotransporter, pectate lyase C-like domain superfamily | Homologous Superfamily | |
IPR015331 | P22 tailspike C-terminal domain | Domain | |
IPR036730 | Phage P22 tailspike-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR009093 | Bacteriophage P22 tailspike, N-terminal | Domain | |
IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily |