2X53
Structure of the phage p2 baseplate in its activated conformation with Sr
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
K [auth J] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
K [auth J] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
K [auth J] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
M [auth L] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
M [auth L] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
M [auth L] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
N [auth M] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
N [auth M] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
N [auth M] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
O [auth N] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
O [auth N] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
O [auth N] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
P [auth O] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
P [auth O] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
P [auth O] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
Q [auth P] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
Q [auth P] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
Q [auth P] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
R [auth Q] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
R [auth Q] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
R [auth Q] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
S [auth R] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
S [auth R] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
S [auth R] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | Phage fibre proteins | 8036192 | 3000351 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | Virus attachment protein globular domain | 8036189 | 3001376 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8036194 | 3000915 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 1] | Caudo_bapla16_4th | e2x5315 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Caudo_bapla16_4th | ECOD (1.6) |
A [auth 1] | Caudo_bapla16_1st | e2x5311 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Caudo_bapla16_1st | ECOD (1.6) |
A [auth 1] | Caudo_bapla16_2nd | e2x5314 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: N0 domain in phage tail proteins and secretins (From Topology) | T: N0 domain in phage tail proteins and secretins | F: Caudo_bapla16_2nd | ECOD (1.6) |
A [auth 1] | Caudo_bapla16_3rd | e2x5316 | A: a+b complex topology | X: C-terminal insertion domain in phage tail proteins (From Topology) | H: C-terminal insertion domain in phage tail proteins (From Topology) | T: C-terminal insertion domain in phage tail proteins | F: Caudo_bapla16_3rd | ECOD (1.6) |
AA [auth Z] | Caudo_bapla16_4th | e2x53Z5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Caudo_bapla16_4th | ECOD (1.6) |
AA [auth Z] | Caudo_bapla16_1st | e2x53Z1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Caudo_bapla16_1st | ECOD (1.6) |
AA [auth Z] | Caudo_bapla16_2nd | e2x53Z4 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: N0 domain in phage tail proteins and secretins (From Topology) | T: N0 domain in phage tail proteins and secretins | F: Caudo_bapla16_2nd | ECOD (1.6) |
AA [auth Z] | Caudo_bapla16_3rd | e2x53Z6 | A: a+b complex topology | X: C-terminal insertion domain in phage tail proteins (From Topology) | H: C-terminal insertion domain in phage tail proteins (From Topology) | T: C-terminal insertion domain in phage tail proteins | F: Caudo_bapla16_3rd | ECOD (1.6) |
Z [auth Y] | Caudo_bapla16_4th | e2x53Y5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Caudo_bapla16_4th | ECOD (1.6) |
Z [auth Y] | Caudo_bapla16_1st | e2x53Y1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Caudo_bapla16_1st | ECOD (1.6) |
Z [auth Y] | Caudo_bapla16_2nd | e2x53Y4 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: N0 domain in phage tail proteins and secretins (From Topology) | T: N0 domain in phage tail proteins and secretins | F: Caudo_bapla16_2nd | ECOD (1.6) |
Z [auth Y] | Caudo_bapla16_3rd | e2x53Y6 | A: a+b complex topology | X: C-terminal insertion domain in phage tail proteins (From Topology) | H: C-terminal insertion domain in phage tail proteins (From Topology) | T: C-terminal insertion domain in phage tail proteins | F: Caudo_bapla16_3rd | ECOD (1.6) |
B [auth A] | Caudo_bapla_RBP_1st | e2x53A5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
B [auth A] | Caudo_bapla_RBP_3rd | e2x53A4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
B [auth A] | Caudo_bapla_RBP_1st_1 | e2x53A3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
B [auth A] | Caudo_bapla_RBP_2nd | e2x53A6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
C [auth B] | Caudo_bapla_RBP_1st | e2x53B5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
C [auth B] | Caudo_bapla_RBP_3rd | e2x53B4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
C [auth B] | Caudo_bapla_RBP_1st_1 | e2x53B3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
C [auth B] | Caudo_bapla_RBP_2nd | e2x53B6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
D [auth C] | Caudo_bapla_RBP_1st | e2x53C5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
D [auth C] | Caudo_bapla_RBP_3rd | e2x53C4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
D [auth C] | Caudo_bapla_RBP_1st_1 | e2x53C3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
D [auth C] | Caudo_bapla_RBP_2nd | e2x53C6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
E [auth D] | Caudo_bapla_RBP_1st | e2x53D5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
E [auth D] | Caudo_bapla_RBP_3rd | e2x53D4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
E [auth D] | Caudo_bapla_RBP_1st_1 | e2x53D3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
E [auth D] | Caudo_bapla_RBP_2nd | e2x53D6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
F [auth E] | Caudo_bapla_RBP_1st | e2x53E5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
F [auth E] | Caudo_bapla_RBP_3rd | e2x53E4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
F [auth E] | Caudo_bapla_RBP_1st_1 | e2x53E3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
F [auth E] | Caudo_bapla_RBP_2nd | e2x53E6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
G [auth F] | Caudo_bapla_RBP_1st | e2x53F5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
G [auth F] | Caudo_bapla_RBP_3rd | e2x53F4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
G [auth F] | Caudo_bapla_RBP_1st_1 | e2x53F3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
G [auth F] | Caudo_bapla_RBP_2nd | e2x53F6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
I [auth H] | Caudo_bapla_RBP_1st | e2x53H5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
I [auth H] | Caudo_bapla_RBP_3rd | e2x53H4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
I [auth H] | Caudo_bapla_RBP_1st_1 | e2x53H3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
I [auth H] | Caudo_bapla_RBP_2nd | e2x53H6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
J [auth I] | Caudo_bapla_RBP_1st | e2x53I5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
J [auth I] | Caudo_bapla_RBP_3rd | e2x53I4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
J [auth I] | Caudo_bapla_RBP_1st_1 | e2x53I3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
J [auth I] | Caudo_bapla_RBP_2nd | e2x53I6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
K [auth J] | Caudo_bapla_RBP_1st | e2x53J5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
K [auth J] | Caudo_bapla_RBP_3rd | e2x53J4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
K [auth J] | Caudo_bapla_RBP_1st_1 | e2x53J3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
K [auth J] | Caudo_bapla_RBP_2nd | e2x53J6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
L [auth K] | Caudo_bapla_RBP_1st | e2x53K5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
L [auth K] | Caudo_bapla_RBP_3rd | e2x53K4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
L [auth K] | Caudo_bapla_RBP_1st_1 | e2x53K3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
L [auth K] | Caudo_bapla_RBP_2nd | e2x53K6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
M [auth L] | Caudo_bapla_RBP_1st | e2x53L5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
M [auth L] | Caudo_bapla_RBP_3rd | e2x53L4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
M [auth L] | Caudo_bapla_RBP_1st_1 | e2x53L3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
M [auth L] | Caudo_bapla_RBP_2nd | e2x53L6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
N [auth M] | Caudo_bapla_RBP_1st | e2x53M5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
N [auth M] | Caudo_bapla_RBP_3rd | e2x53M4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
N [auth M] | Caudo_bapla_RBP_1st_1 | e2x53M3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
N [auth M] | Caudo_bapla_RBP_2nd | e2x53M6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
O [auth N] | Caudo_bapla_RBP_1st | e2x53N5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
O [auth N] | Caudo_bapla_RBP_3rd | e2x53N4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
O [auth N] | Caudo_bapla_RBP_1st_1 | e2x53N3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
O [auth N] | Caudo_bapla_RBP_2nd | e2x53N6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
P [auth O] | Caudo_bapla_RBP_1st | e2x53O5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
P [auth O] | Caudo_bapla_RBP_3rd | e2x53O4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
P [auth O] | Caudo_bapla_RBP_1st_1 | e2x53O3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
P [auth O] | Caudo_bapla_RBP_2nd | e2x53O6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
Q [auth P] | Caudo_bapla_RBP_1st | e2x53P5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
Q [auth P] | Caudo_bapla_RBP_3rd | e2x53P4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
Q [auth P] | Caudo_bapla_RBP_1st_1 | e2x53P3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
Q [auth P] | Caudo_bapla_RBP_2nd | e2x53P6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
R [auth Q] | Caudo_bapla_RBP_1st | e2x53Q5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
R [auth Q] | Caudo_bapla_RBP_3rd | e2x53Q4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
R [auth Q] | Caudo_bapla_RBP_1st_1 | e2x53Q3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
R [auth Q] | Caudo_bapla_RBP_2nd | e2x53Q6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
S [auth R] | Caudo_bapla_RBP_1st | e2x53R5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
S [auth R] | Caudo_bapla_RBP_3rd | e2x53R4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
S [auth R] | Caudo_bapla_RBP_1st_1 | e2x53R3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
S [auth R] | Caudo_bapla_RBP_2nd | e2x53R6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
H [auth G] | Caudo_bapla_RBP_1st | e2x53G5 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: Caudo_bapla_RBP_1st | ECOD (1.6) |
H [auth G] | Caudo_bapla_RBP_3rd | e2x53G4 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Caudo_bapla_RBP_3rd | ECOD (1.6) |
H [auth G] | Caudo_bapla_RBP_1st_1 | e2x53G3 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_1st_1 | ECOD (1.6) |
H [auth G] | Caudo_bapla_RBP_2nd | e2x53G6 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Caudo_bapla_RBP_2nd | ECOD (1.6) |
T [auth S] | Baseplate | e2x53S1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Baseplate | ECOD (1.6) |
T [auth S] | EUF07673 | e2x53S2 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in distal tail protein (Dit)-like proteins (From Topology) | T: Jelly-roll domain in distal tail protein (Dit)-like proteins | F: EUF07673 | ECOD (1.6) |
U [auth T] | Baseplate | e2x53T1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Baseplate | ECOD (1.6) |
U [auth T] | EUF07673 | e2x53T2 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in distal tail protein (Dit)-like proteins (From Topology) | T: Jelly-roll domain in distal tail protein (Dit)-like proteins | F: EUF07673 | ECOD (1.6) |
V [auth U] | Baseplate | e2x53U1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Baseplate | ECOD (1.6) |
V [auth U] | EUF07673 | e2x53U2 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in distal tail protein (Dit)-like proteins (From Topology) | T: Jelly-roll domain in distal tail protein (Dit)-like proteins | F: EUF07673 | ECOD (1.6) |
W [auth V] | Baseplate | e2x53V1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Baseplate | ECOD (1.6) |
W [auth V] | EUF07673 | e2x53V2 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in distal tail protein (Dit)-like proteins (From Topology) | T: Jelly-roll domain in distal tail protein (Dit)-like proteins | F: EUF07673 | ECOD (1.6) |
X [auth W] | Baseplate | e2x53W1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Baseplate | ECOD (1.6) |
X [auth W] | EUF07673 | e2x53W2 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in distal tail protein (Dit)-like proteins (From Topology) | T: Jelly-roll domain in distal tail protein (Dit)-like proteins | F: EUF07673 | ECOD (1.6) |
Y [auth X] | Baseplate | e2x53X1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Baseplate | ECOD (1.6) |
Y [auth X] | EUF07673 | e2x53X2 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in distal tail protein (Dit)-like proteins (From Topology) | T: Jelly-roll domain in distal tail protein (Dit)-like proteins | F: EUF07673 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth 1], AA [auth Z], Z [auth Y] | PF16792 | Phage tail base-plate attachment protein N-terminal barrel domain (Caud_bapl16_1st) | Phage tail base-plate attachment protein N-terminal barrel domain | Caudo_bapla16 is a family of ORF16 tail-phage P2-like proteins that forms part of the base-plate at the tip of the phage tail. The whole base-plate complex is involved in host recognition and attachment, and consists of several proteins derived from ... | Domain |
A [auth 1], AA [auth Z], Z [auth Y] | PF20955 | Phage tail base-plate attachment protein C-terminal barrel domain (Caud_bapl16_4th) | Phage tail base-plate attachment protein C-terminal barrel domain | Caudo_bapla16 is a family of ORF16 tail-phage P2-like proteins that forms part of the base-plate at the tip of the phage tail. The whole base-plate complex is involved in host recognition and attachment, and consists of several proteins derived from ... | Domain |
A [auth 1], AA [auth Z], Z [auth Y] | PF20954 | Phage tail base-plate attachment protein N0 domain (Caud_bapl16_2nd) | Phage tail base-plate attachment protein N0 domain | Caudo_bapla16 is a family of ORF16 tail-phage P2-like proteins that forms part of the base-plate at the tip of the phage tail. The whole base-plate complex is involved in host recognition and attachment, and consists of several proteins derived from ... | Domain |
A [auth 1], AA [auth Z], Z [auth Y] | PF20953 | Phage tail base-plate attachment protein C-terminal insertion domain (Caud_bapl16_3rd) | Phage tail base-plate attachment protein C-terminal insertion domain | Caudo_bapla16 is a family of ORF16 tail-phage P2-like proteins that forms part of the base-plate at the tip of the phage tail. The whole base-plate complex is involved in host recognition and attachment, and consists of several proteins derived from ... | Domain |
PF21564 | Lactococcus phage p2, Receptor binding protein, neck domain (Caudo_bapla_RBP_neck) | Lactococcus phage p2, Receptor binding protein, neck domain | This domain is found centrally located in Receptor binding protein from Lactococcus phage p2 (RBP, also known as Gp18) and similar proteins from closely related lactococcal phages. RBP shows three domains: the N-terminal shoulder domain (Pfam:PF20747 ... | Domain | |
PF20747 | Lactophage receptor-binding protein N-terminal shoulder domain (Caudo_bapla_N) | Lactophage receptor-binding protein N-terminal shoulder domain | Caudo_bapla_RBP is a family of proteins expressed from ORF18 of the Lactococcus P2-like phage. This is one of three protein domain, shoulder, neck, and head, that form the phage tail base-plate. This entry represents the shoulder domain. This domain ... | Domain | |
PF08931 | Lactophage receptor-binding protein C-terminal head domain (Caudo_bapla_RBP) | Lactophage receptor-binding protein C-terminal head domain | Caudo_bapla_RBP is a family of proteins expressed from ORF18 of the Lactococcus P2-like phage. This is one of three protein domains, shoulders, neck, and head, that form the phage tail base-plate. In the overall structure this head domain exists as s ... | Domain | |
PF16774 | Distal tail protein, N-terminal domain (Dit_N) | Distal tail protein, N-terminal domain | This domain is found at the N-terminal end of Distal tail protein from Lactococcus phage p2 (Dit) and similar sequences predominantly found in Siphoviridae and bacterial prophages from Lactobacillales. Dit has a structural role and forms the distal ... | Domain | |
PF21766 | Dit, C-terminal domain (Dit_C) | Dit, C-terminal domain | This domain is found at the C-terminal end of Distal tail protein from Lactococcus phage p2 (Dit or Gp15) and similar proteins predominantly found in virus. Dit self-associates as two rings organised back to back, with a central channel allowing DNA ... | Domain |