2X05
Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-Galactosidase/glucuronidase domain-like | 8055215 | 3002047 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | beta-Galactosidase/glucuronidase domain-like | 8055466 | 3002047 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | galactose-binding domain-like | 8037851 | 3000087 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | (Trans)glycosidases | 8037853 | 3000313 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | beta-Galactosidase/glucuronidase domain-like | 8055468 | 3002047 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | (Trans)glycosidases | 8037853 | 3000313 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-Galactosidase/glucuronidase domain-like | 8055215 | 3002047 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-Galactosidase/glucuronidase domain-like | 8055466 | 3002047 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-Galactosidase/glucuronidase domain-like | 8055468 | 3002047 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | galactose-binding domain-like | 8037851 | 3000087 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_2_N | e2x05A1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Glyco_hydro_2_N | ECOD (1.6) |
A | Glyco_hydro_2 | e2x05A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_hydro_2 | ECOD (1.6) |
A | A2M_N_like | e2x05A4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_like | ECOD (1.6) |
A | DUF4232_like | e2x05A3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF4232_like | ECOD (1.6) |
A | Glyco_hydro_2_C | e2x05A5 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_2_C | ECOD (1.6) |
B | Glyco_hydro_2_N | e2x05B1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Glyco_hydro_2_N | ECOD (1.6) |
B | Glyco_hydro_2 | e2x05B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_hydro_2 | ECOD (1.6) |
B | A2M_N_like | e2x05B4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_like | ECOD (1.6) |
B | DUF4232_like | e2x05B3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF4232_like | ECOD (1.6) |
B | Glyco_hydro_2_C | e2x05B5 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_2_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
B | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00703 | Glycosyl hydrolases family 2 (Glyco_hydro_2) | Glycosyl hydrolases family 2 | This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | Domain | |
PF18368 | Exo-beta-D-glucosaminidase Ig-fold domain (Ig_GlcNase) | Exo-beta-D-glucosaminidase Ig-fold domain | This domain can be found in 2 glycoside hydrolase subfamily of beta-glucosaminidases (EC:3.2.1.165) such as CsxA, from Amycolatopsis orientalis that has exo-beta-D-glucosaminidase (exo-chitosanase) activity. It has an immunoglobulin-like topology [1] ... | Domain | |
PF22666 | Glycosyl hydrolase 2 galactose-binding domain-like (Glyco_hydro_2_N2) | Glycosyl hydrolase 2 galactose-binding domain-like | This domain is found in a number of proteins belonging to glycosyl hydrolase 2 family [1-5]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041351 | Exo-beta-D-glucosaminidase, Ig-fold domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR006102 | Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich | Domain | |
IPR036156 | Beta-Galactosidase/glucuronidase domain superfamily | Homologous Superfamily | |
IPR006104 | Glycosyl hydrolases family 2, sugar binding domain | Domain | |
IPR005084 | Carbohydrate binding module family 6 | Domain | |
IPR043534 | Exo-beta-D-glucosaminidase/Endo-beta-mannosidase | Family | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |