Two intramolecular isopeptide bonds are identified in the crystal structure of the Streptococcus gordonii SspB C-terminal domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Antigen_C | e2wzaA5 | A: beta barrels | X: Fusion glycoprotein F2 | H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | F: Antigen_C | ECOD (v294.2) |
| A | SpaA | e2wzaA6 | A: beta barrels | X: Fusion glycoprotein F2 | H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | F: SpaA | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.740 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| AGGLUTININ RECEPTOR | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009578 | Cell surface antigen I/II A repeat | Repeat | |
| IPR013574 | Glucan-binding protein C/Surface antigen I/II, V-domain | Domain | |
| IPR041324 | Antigen I/II, N-terminal | Domain | |
| IPR032300 | Cell surface antigen, C-terminal | Domain | |
| IPR036234 | Glucan-binding protein C/Surface antigen I/II, V-domain superfamily | Homologous Superfamily | |
| IPR026345 | Adhesin isopeptide-forming adherence domain | Domain | |
| IPR021197 | Cross-wall-targeting lipoprotein motif | Conserved Site | |
| IPR019931 | LPXTG cell wall anchor motif | Conserved Site |














