2WV5
Crystal structure of foot-and-mouth disease virus 3C protease in complex with a decameric peptide corresponding to the VP1-2A cleavage junction with a GLN to Glu substitution at P1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2wv5a_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Viral cysteine protease of trypsin fold | automated matches | (Foot-and-mouth disease virus (strain A10-61) ) [TaxId: 12112 ], | SCOPe (2.08) |
B | d2wv5b_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Viral cysteine protease of trypsin fold | automated matches | (Foot-and-mouth disease virus (strain A10-61) ) [TaxId: 12112 ], | SCOPe (2.08) |
C | d2wv5c_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Viral cysteine protease of trypsin fold | automated matches | (Foot-and-mouth disease virus (strain A10-61) ) [TaxId: 12112 ], | SCOPe (2.08) |
D | d2wv5d_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Viral cysteine protease of trypsin fold | automated matches | (Foot-and-mouth disease virus (strain A10-61) ) [TaxId: 12112 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trypsin-like serine proteases | 8034646 | 3000114 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Trypsin-like serine proteases | 8034646 | 3000114 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Trypsin-like serine proteases | 8034646 | 3000114 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Trypsin-like serine proteases | 8034646 | 3000114 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_C3 | e2wv5A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Peptidase_C3 | ECOD (1.6) |
B | Peptidase_C3 | e2wv5B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Peptidase_C3 | ECOD (1.6) |
C | Peptidase_C3 | e2wv5C1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Peptidase_C3 | ECOD (1.6) |
D | Peptidase_C3 | e2wv5D1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Peptidase_C3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
B | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
C | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
D | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
ACE | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 | :