2WMZ
Structure of a mutated TolC
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2wmza_ | Membrane and cell surface proteins and peptides | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d2wmzb_ | Membrane and cell surface proteins and peptides | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
C | d2wmzc_ | Membrane and cell surface proteins and peptides | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Outer membrane efflux proteins (OEP) | 8037933 | 3000246 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Outer membrane efflux proteins (OEP) | 8037933 | 3000246 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Outer membrane efflux proteins (OEP) | 8037933 | 3000246 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | OEP | e2wmzA1 | A: a+b duplicates or obligate multimers | X: Outer membrane efflux proteins (OEP) (From Topology) | H: Outer membrane efflux proteins (OEP) (From Topology) | T: Outer membrane efflux proteins (OEP) | F: OEP | ECOD (1.6) |
B | OEP | e2wmzB1 | A: a+b duplicates or obligate multimers | X: Outer membrane efflux proteins (OEP) (From Topology) | H: Outer membrane efflux proteins (OEP) (From Topology) | T: Outer membrane efflux proteins (OEP) | F: OEP | ECOD (1.6) |
C | OEP | e2wmzC1 | A: a+b duplicates or obligate multimers | X: Outer membrane efflux proteins (OEP) (From Topology) | H: Outer membrane efflux proteins (OEP) (From Topology) | T: Outer membrane efflux proteins (OEP) | F: OEP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1600.10 | Mainly Alpha | Up-down Bundle | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | CATH (4.3.0) |
B | 1.20.1600.10 | Mainly Alpha | Up-down Bundle | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | CATH (4.3.0) |
C | 1.20.1600.10 | Mainly Alpha | Up-down Bundle | Outer membrane efflux proteins (OEP) | Outer membrane efflux proteins (OEP) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02321 | Outer membrane efflux protein (OEP) | Outer membrane efflux protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR051906 | Bacterial Outer Membrane Factor (OMF) | Family | |
IPR010130 | Type I secretion outer membrane protein, TolC | Family | |
IPR003423 | Outer membrane efflux protein | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | Outer membrane efflux proteins (n=12,S=18) trimeric | Outer membrane efflux proteins |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |