2VWS
Crystal structure of YfaU, a metal ion dependent class II aldolase from Escherichia coli K12
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2vwsa_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Phosphoenolpyruvate/pyruvate domain | automated matches | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d2vwsb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Phosphoenolpyruvate/pyruvate domain | automated matches | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
C | d2vwsc_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Phosphoenolpyruvate/pyruvate domain | automated matches | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | HpcH/HpaI aldolase | 8078842 | 4003274 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Phosphoenolpyruvate/pyruvate domain | 8078843 | 3000510 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Phosphoenolpyruvate/pyruvate domain | 8078843 | 3000510 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Phosphoenolpyruvate/pyruvate domain | 8078843 | 3000510 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03328 | e2vwsA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF03328 | ECOD (1.6) |
B | PF03328 | e2vwsB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF03328 | ECOD (1.6) |
C | PF03328 | e2vwsC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF03328 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.60 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphoenolpyruvate-binding domains | CATH (4.3.0) |
B | 3.20.20.60 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphoenolpyruvate-binding domains | CATH (4.3.0) |
C | 3.20.20.60 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphoenolpyruvate-binding domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03328 | HpcH/HpaI aldolase/citrate lyase family (HpcH_HpaI) | HpcH/HpaI aldolase/citrate lyase family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015813 | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | Homologous Superfamily | |
IPR050251 | HpcH/HpaI Aldolase | Family | |
IPR023593 | 2-keto-3-deoxy-L-rhamnonate aldolase | Family | |
IPR040442 | Pyruvate kinase-like domain superfamily | Homologous Superfamily | |
IPR005000 | HpcH/HpaI aldolase/citrate lyase domain | Domain |