2VVE

Crystal structure of the stem and receptor binding domain of the spike protein P1 from bacteriophage PM2

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22188e2vveA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF22188ECOD (1.6)
APF22465e2vveA2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF22465ECOD (1.6)
BPF22188e2vveB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF22188ECOD (1.6)
BPF22465e2vveB2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF22465ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.770 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
A2.60.120.720 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.770 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.720 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF22465Spike protein P1, second jelly-roll domain (Spike_JR2)Spike protein P1, second jelly-roll domainThis entry represents the second jelly-roll domain of Spike protein P1 from Pseudoalteromonas phage PM2 [1].Domain
A, B
PF22188Phage PM2 spike protein P1 (Phage_spike_P1)Phage PM2 spike protein P1The spike protein P1, also known as Protein I, is a key component of the Pseudoalteromonas phage PM2 (Bacteriophage PM2). This protein is responsible for receptor binding and is located at the fivefold vertices of the viral capsid. It plays a crucial ...The spike protein P1, also known as Protein I, is a key component of the Pseudoalteromonas phage PM2 (Bacteriophage PM2). This protein is responsible for receptor binding and is located at the fivefold vertices of the viral capsid. It plays a crucial role in the attachment and entry of the phage into its host cell.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
SPIKE PROTEIN P1- -