2VBK
NATIVE TAILSPIKE PROTEIN OF BACTERIOPHAGE SF6
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07791 | e2vbkA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domain in tailspike protein (From Topology) | T: Ig-like domain in tailspike protein | F: EUF07791 | ECOD (1.6) |
A | Pectate_lyase_3 | e2vbkA2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: Pectate_lyase_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.160.20.10 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | Single-stranded right-handed beta-helix, Pectin lyase-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21519 | Tailspike protein, C-terminal (Tailspike_C) | Tailspike protein, C-terminal | Tailspike protein from Shigella phage Sf6 specifically mediates the attachment to their hosts. Its structure revealed a conserved architecture with a central, right-handed beta-helix. The C-terminal domain adopts a beta-sandwich fold, is represented ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012334 | Pectin lyase fold | Homologous Superfamily | |
IPR036730 | Phage P22 tailspike-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR049104 | Tail spike protein-like, C-terminal domain | Domain | |
IPR009093 | Bacteriophage P22 tailspike, N-terminal | Domain | |
IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily |