2V7T
X-ray crystal structure of 5'-fluorodeoxyadenosine synthase s158g mutant complexed with s-adenosyl-l-homocysteine and chloride ion
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Bacterial fluorinating enzyme, C-terminal domain | 8040851 | 3001954 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Bacterial fluorinating enzyme, N-terminal domain | 8040852 | 3000872 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Bacterial fluorinating enzyme, C-terminal domain | 8040851 | 3001954 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Bacterial fluorinating enzyme, N-terminal domain | 8040852 | 3000872 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Bacterial fluorinating enzyme, N-terminal domain | 8040852 | 3000872 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Bacterial fluorinating enzyme, C-terminal domain | 8040851 | 3001954 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SAM_adeno_trans_C | e2v7tA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Bacterial fluorinating enzyme-C | F: SAM_adeno_trans_C | ECOD (1.6) |
A | SAM_adeno_trans_N | e2v7tA2 | A: a/b three-layered sandwiches | X: Bacterial fluorinating enzyme, N-terminal domain (From Topology) | H: Bacterial fluorinating enzyme, N-terminal domain (From Topology) | T: Bacterial fluorinating enzyme, N-terminal domain | F: SAM_adeno_trans_N | ECOD (1.6) |
B | SAM_adeno_trans_C | e2v7tB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Bacterial fluorinating enzyme-C | F: SAM_adeno_trans_C | ECOD (1.6) |
B | SAM_adeno_trans_N | e2v7tB2 | A: a/b three-layered sandwiches | X: Bacterial fluorinating enzyme, N-terminal domain (From Topology) | H: Bacterial fluorinating enzyme, N-terminal domain (From Topology) | T: Bacterial fluorinating enzyme, N-terminal domain | F: SAM_adeno_trans_N | ECOD (1.6) |
C | SAM_adeno_trans_C | e2v7tC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Bacterial fluorinating enzyme-C | F: SAM_adeno_trans_C | ECOD (1.6) |
C | SAM_adeno_trans_N | e2v7tC2 | A: a/b three-layered sandwiches | X: Bacterial fluorinating enzyme, N-terminal domain (From Topology) | H: Bacterial fluorinating enzyme, N-terminal domain (From Topology) | T: Bacterial fluorinating enzyme, N-terminal domain | F: SAM_adeno_trans_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.10790 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal | CATH (4.3.0) |
A | 2.40.30.90 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
B | 3.40.50.10790 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal | CATH (4.3.0) |
B | 2.40.30.90 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
C | 3.40.50.10790 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal | CATH (4.3.0) |
C | 2.40.30.90 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01887 | SAM hydroxide adenosyltransferase N-terminal domain (SAM_HAT_N) | SAM hydroxide adenosyltransferase N-terminal domain | This is a family of proteins, previously known as DUF62, found in archaebacteria and bacteria. The structure of proteins in this family is similar to that of a bacterial fluorinating enzyme [1]. S-adenosyl-l-methionine hydroxide adenosyltransferases ... | Domain | |
PF20257 | SAM hydroxide adenosyltransferase C-terminal domain (SAM_HAT_C) | SAM hydroxide adenosyltransferase C-terminal domain | This is a family of proteins, previously known as DUF62, found in archaebacteria and bacteria. The structure of proteins in this family is similar to that of a bacterial fluorinating enzyme [1]. S-adenosyl-l-methionine hydroxide adenosyltransferases ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
5'-FLUORO-5'-DEOXYADENOSINE SYNTHASE | - | - |