2TDT | pdb_00002tdt

COMPLEX OF TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE WITH 2-AMINOPIMELATE AND COENZYME A


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyTrimeric LpxA-like enzymes 8042987 3001804 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATPR_2, TPR_P4He2tdtA1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: ARM repeatT: ARM repeatF: TPR_2, TPR_P4HECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.166.10 Mainly Alpha Orthogonal Bundle Tetrahydrodipicolinate-N-succinyltransferase Chain A, domain 1CATH (4.3.0)
A2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (4.3.0)

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase  M-CSA #932

2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (also known as tetrahydrodipicolinate N-succinyltransferase or DapD) is part of the succinyl route of of lysine/diaminopimelic acid (DAP) biosynthesis. DAP biosynthesis is one of the two lysine biosynthesis pathways that are known to have evolved.

Defined by 3 residues: ASP:A_3-141GLY:A_2-166GLU:A_2-189
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