2RHK
Crystal structure of influenza A NS1A protein in complex with F2F3 fragment of human cellular factor CPSF30, Northeast Structural Genomics Targets OR8C and HR6309A
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2rhka_ | Alpha and beta proteins (a+b) | Ns1 effector domain-like | Ns1 effector domain-like | Ns1 effector domain-like | automated matches | (Influenza A virus ) [TaxId: 11320 ], | SCOPe (2.08) |
B | d2rhkb_ | Alpha and beta proteins (a+b) | Ns1 effector domain-like | Ns1 effector domain-like | Ns1 effector domain-like | automated matches | (Influenza A virus ) [TaxId: 11320 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ns1 effector domain-like | 8086490 | 3000759 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ns1 effector domain-like | 8086490 | 3000759 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CCCH zinc finger-like | 8051781 | 3001741 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CCCH zinc finger-like | 8051782 | 3001741 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Type 3 CCCH Zinc finger | 8051519 | 4007414 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | CCCH zinc finger-like | 8051781 | 3001741 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | CCCH zinc finger-like | 8051782 | 3001741 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flu_NS1_C | e2rhkA1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
B | Flu_NS1_C | e2rhkB1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
C | Torus | e2rhkC1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Torus | ECOD (1.6) |
C | zf-CCCH_6 | e2rhkC2 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: zf-CCCH_6 | ECOD (1.6) |
D | Torus | e2rhkD1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Torus | ECOD (1.6) |
D | zf-CCCH_6 | e2rhkD2 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: zf-CCCH_6 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.420.330 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
B | 3.30.420.330 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
C | 4.10.1000.10 | Few Secondary Structures | Irregular | CCCH zinc finger | Zinc finger, CCCH-type | CATH (4.3.0) |
D | 4.10.1000.10 | Few Secondary Structures | Irregular | CCCH zinc finger | Zinc finger, CCCH-type | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00600 | Influenza non-structural protein (NS1) (Flu_NS1) | Influenza non-structural protein (NS1) | - | Family | |
PF15663 | Zinc-finger containing family (zf-CCCH_3) | Zinc-finger containing family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily | |
IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily | |
IPR000256 | Influenza A virus NS1 protein | Family | |
IPR004208 | Influenza non-structural protein (NS1) | Family | |
IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily | |
IPR000571 | Zinc finger, CCCH-type | Domain | |
IPR036855 | Zinc finger, CCCH-type superfamily | Homologous Superfamily | |
IPR041686 | Zinc-finger CCCH domain | Domain | |
IPR001878 | Zinc finger, CCHC-type | Domain | |
IPR045348 | CPSF complex subunit CPSF4-like | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
O95639 | :