2QKK
Human RNase H catalytic domain mutant D210N in complex with 14-mer RNA/DNA hybrid
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
N [auth B] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
P [auth F] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
Q [auth I] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
S [auth M] | SCOP2 Family | Ribonuclease H-like | 8075083 | 4000541 | SCOP2 (2021-05-27) |
S [auth M] | SCOP2 Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2 (2021-05-27) |
T [auth N] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
U [auth R] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
V [auth S] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
M [auth A] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
O [auth E] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
R [auth J] | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
W | SCOP2B Superfamily | Ribonuclease H-like | 8075084 | 3000143 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
N [auth B] | PF00075 | e2qkkB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
P [auth F] | PF00075 | e2qkkF1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
Q [auth I] | PF00075 | e2qkkI1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
S [auth M] | PF00075 | e2qkkM1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
T [auth N] | PF00075 | e2qkkN1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
U [auth R] | PF00075 | e2qkkR1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
V [auth S] | PF00075 | e2qkkS1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
M [auth A] | PF00075 | e2qkkA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
O [auth E] | PF00075 | e2qkkE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
R [auth J] | PF00075 | e2qkkJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
W | PF00075 | e2qkkW1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00075 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00075 | RNase H (RNase_H) | RNase H | RNase H digests the RNA strand of an RNA/DNA hybrid. Important enzyme in retroviral replication cycle, and often found as a domain associated with reverse transcriptases. Structure is a mixed alpha+beta fold with three a/b/a layers. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
IPR037056 | Ribonuclease H1, N-terminal domain superfamily | Homologous Superfamily | |
IPR002156 | Ribonuclease H domain | Domain | |
IPR011320 | Ribonuclease H1, N-terminal | Domain | |
IPR009027 | Large ribosomal subunit protein bL9/RNase H1, N-terminal | Homologous Superfamily | |
IPR017067 | Ribonuclease H1, eukaryote | Family | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |