2Q5B
High resolution structure of Plastocyanin from Phormidium laminosum
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2q5ba_ | All beta proteins | Cupredoxin-like | Cupredoxins | Plastocyanin/azurin-like | Plastocyanin | (Phormidium laminosum ) [TaxId: 32059 ], | SCOPe (2.08) |
B | d2q5bb_ | All beta proteins | Cupredoxin-like | Cupredoxins | Plastocyanin/azurin-like | Plastocyanin | (Phormidium laminosum ) [TaxId: 32059 ], | SCOPe (2.08) |
C | d2q5bc_ | All beta proteins | Cupredoxin-like | Cupredoxins | Plastocyanin/azurin-like | Plastocyanin | (Phormidium laminosum ) [TaxId: 32059 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Plastocyanin/azurin-like | 8022837 | 4002150 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Cupredoxins | 8035217 | 3000886 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Cupredoxins | 8035217 | 3000886 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cupredoxins | 8035217 | 3000886 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Copper-bind | e2q5bA1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Copper-bind | ECOD (1.6) |
B | Copper-bind | e2q5bB1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Copper-bind | ECOD (1.6) |
C | Copper-bind | e2q5bC1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Copper-bind | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
B | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
C | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00127 | Copper binding proteins, plastocyanin/azurin family (Copper-bind) | Copper binding proteins, plastocyanin/azurin family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002387 | Plastocyanin | Family | |
IPR000923 | Blue (type 1) copper domain | Domain | |
IPR028871 | Blue (type 1) copper protein, binding site | Binding Site | |
IPR008972 | Cupredoxin | Homologous Superfamily | |
IPR023511 | Plastocyanin, cyanobacteria | Family | |
IPR001235 | Blue (type 1) copper protein, plastocyanin-type | Family |