2Q07
Crystal structure of AF0587, a protein of unknown function
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2q07a1 | All beta proteins | PUA domain-like | PUA domain-like | PUA domain | Uncharacterized protein AF0587 | (Archaeoglobus fulgidus DSM 4304 ) [TaxId: 224325 ], | SCOPe (2.08) |
A | d2q07a2 | Alpha and beta proteins (a/b) | Uracil-DNA glycosylase-like | Uracil-DNA glycosylase-like | AF0587 domain-like | Uncharacterized protein AF0587 | (Archaeoglobus fulgidus DSM 4304 ) [TaxId: 224325 ], | SCOPe (2.08) |
A | d2q07a3 | Alpha and beta proteins (a+b) | Cystatin-like | Pre-PUA domain | AF0587 pre C-terminal domain-like | Uncharacterized protein AF0587 | (Archaeoglobus fulgidus DSM 4304 ) [TaxId: 224325 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | PUA domain | 8023797 | 4003536 | SCOP2 (2022-06-29) |
A | SCOP2 Family | AF0587 domain-like | 8023799 | 4002102 | SCOP2 (2022-06-29) |
A | SCOP2 Family | AF0587 pre C-terminal domain-like | 8023800 | 4001697 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PUA domain-like | 8036177 | 3001015 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Uracil-DNA glycosylase-like | 8036179 | 3001106 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Pre-PUA domain | 8036180 | 3001126 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PUA | e2q07A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PUA | ECOD (1.6) |
A | COG1549_like | e2q07A2 | A: a+b two layers | X: Cystatin-like | H: Pre-PUA domain (From Topology) | T: Pre-PUA domain | F: COG1549_like | ECOD (1.6) |
A | COG1549 | e2q07A3 | A: a/b three-layered sandwiches | X: Uracil-DNA glycosylase-like (From Topology) | H: Uracil-DNA glycosylase-like (From Topology) | T: Uracil-DNA glycosylase-like | F: COG1549 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.10630 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Uracil-DNA glycosylase-like | CATH (4.3.0) |
A | 3.10.450.90 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
A | 2.30.130.10 | Mainly Beta | Roll | Archaeosine Trna-guanine Transglycosylase | Chain: A, domain 4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22176 | AF_0587-like, pre-PUA domain (AF_0587-like_pre-PUA) | AF_0587-like, pre-PUA domain | This domain is found in AF_0587 from Archaeoglobus fulgidus. It is found N-terminal to the PUA domain (Pfam:PF01472). | Domain | |
PF01472 | PUA domain (PUA) | PUA domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015947 | PUA-like superfamily | Homologous Superfamily | |
IPR050076 | Archaeosine Synthase Type 1/Queuine TRNA-Ribosyltransferase | Family | |
IPR054032 | AF_0587-like, pre-PUA domain | Domain | |
IPR036895 | Uracil-DNA glycosylase-like domain superfamily | Homologous Superfamily | |
IPR036974 | PUA domain superfamily | Homologous Superfamily | |
IPR038250 | TGT, patch-forming C2 domain superfamily | Homologous Superfamily | |
IPR040777 | Domain of unknown function DUF5591 | Domain | |
IPR036511 | Queuine tRNA-ribosyltransferase-like | Homologous Superfamily | |
IPR002616 | tRNA-guanine(15) transglycosylase-like | Domain | |
IPR053418 | Archaeosine Synthase Type 1 | Family | |
IPR002478 | PUA domain | Domain |