2PXQ
Variant 14 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2pxqa_ | All alpha proteins | Signal peptide-binding domain | Signal peptide-binding domain | Signal peptide-binding domain | Signal sequence binding protein Ffh | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.260.30 | Mainly Alpha | Orthogonal Bundle | 434 Repressor (Amino-terminal Domain) | Signal recognition particle, SRP54 subunit, M-domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02978 | Signal peptide binding domain (SRP_SPB) | Signal peptide binding domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain | Domain | |
IPR022941 | Signal recognition particle, SRP54 subunit | Family | |
IPR004125 | Signal recognition particle, SRP54 subunit, M-domain | Domain | |
IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily | Homologous Superfamily | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR004780 | Signal recognition particle protein | Family | |
IPR013822 | Signal recognition particle SRP54, helical bundle | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily | Homologous Superfamily |