2PSB
Crystal structure of YerB protein from Bacillus subtilis. NorthEast Structural Genomics target SR586
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2psba1 | Alpha and beta proteins (a/b) | YerB-like | YerB-like | YerB-like | Uncharacterized protein YerB | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DUF3048_C | e2psbA1 | A: beta sandwiches | X: C-terminal domain in YerB-like proteins (From Topology) | H: C-terminal domain in YerB-like proteins (From Topology) | T: C-terminal domain in YerB-like proteins | F: DUF3048_C | ECOD (1.6) |
A | DUF3048 | e2psbA2 | A: mixed a+b and a/b | X: N-terminal domain in YerB-like proteins (From Topology) | H: N-terminal domain in YerB-like proteins (From Topology) | T: N-terminal domain in YerB-like proteins | F: DUF3048 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.50.90.10 | Alpha Beta | 3-Layer(bba) Sandwich | YerB-like fold | YerB-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11258 | Protein of unknown function (DUF3048) N-terminal domain (DUF3048) | Protein of unknown function (DUF3048) N-terminal domain | Some members in this bacterial family of proteins are annotated as YerB. However currently no function is known. This entry represents the N-terminal domain. | Domain | |
PF17479 | Protein of unknown function (DUF3048) C-terminal domain (DUF3048_C) | Protein of unknown function (DUF3048) C-terminal domain | Some members in this bacterial family of proteins are annotated as YerB. However currently no function is known. This entry represents the C-terminal domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
YerB protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR035328 | DUF3048, C-terminal domain | Domain | |
IPR023158 | YerB-like superfamily | Homologous Superfamily | |
IPR021416 | DUF3048, N-terminal | Domain |