2PHL

THE STRUCTURE OF PHASEOLIN AT 2.2 ANGSTROMS RESOLUTION: IMPLICATIONS FOR A COMMON VICILIN(SLASH)LEGUMIN STRUCTURE AND THE GENETIC ENGINEERING OF SEED STORAGE PROTEINS

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2phlb1	All beta proteins	Double-stranded beta-helix	RmlC-like cupins	Germin/Seed storage 7S protein	Seed storage 7S protein	(Phaseolus vulgaris ) [TaxId: 3885 ],	SCOPe (2.08)
A	d2phla1	All beta proteins	Double-stranded beta-helix	RmlC-like cupins	Germin/Seed storage 7S protein	Seed storage 7S protein	(Phaseolus vulgaris ) [TaxId: 3885 ],	SCOPe (2.08)
C	d2phlc1	All beta proteins	Double-stranded beta-helix	RmlC-like cupins	Germin/Seed storage 7S protein	Seed storage 7S protein	(Phaseolus vulgaris ) [TaxId: 3885 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	RmlC-like cupins	8043024	3001825	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	RmlC-like cupins	8043026	3001825	SCOP2B (2022-06-29)
A	SCOP2 Family	Germin/Seed storage 7S protein	8030645	4002867	SCOP2 (2022-06-29)
A	SCOP2 Family	Germin/Seed storage 7S protein	8030647	4002867	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	RmlC-like cupins	8043024	3001825	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	RmlC-like cupins	8043026	3001825	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	RmlC-like cupins	8043024	3001825	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RmlC-like cupins	8043026	3001825	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	F_UNCLASSIFIED	e2phlB1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: F_UNCLASSIFIED	ECOD (1.6)
B	PF00190	e2phlB2	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: PF00190	ECOD (1.6)
A	F_UNCLASSIFIED	e2phlA1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: F_UNCLASSIFIED	ECOD (1.6)
A	PF00190	e2phlA2	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: PF00190	ECOD (1.6)
C	F_UNCLASSIFIED	e2phlC1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: F_UNCLASSIFIED	ECOD (1.6)
C	PF00190	e2phlC2	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: PF00190	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
A	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
C	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	PHASEOLIN	nutrient reservoir activity	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle vacuole cytoplasm cellular anatomical entity intracellular membrane-bounded organelle aleurone grain intracellular vesicle cytoplasmic vesicle vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR006045	Cupin 1	Domain
A, B, C	IPR011051	RmlC-like cupin domain superfamily	Homologous Superfamily
A, B, C	IPR050253	Seed Storage and Functional Proteins	Family
A, B, C	IPR014710	RmlC-like jelly roll fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.