2OG4
Structure of an expanded Jab1-MPN-like domain of splicing factor Prp8p from yeast
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2og4a_ | Alpha and beta proteins (a/b) | Cytidine deaminase-like | JAB1/MPN domain | automated matches | automated matches | (Saccharomyces cerevisiae RM11-1a ) [TaxId: 285006 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08084 | PROCT (NUC072) domain (PROCT) | PROCT (NUC072) domain | The PROCT domain is the C-terminal domain in pre-mRNA splicing factors of PRO8 family [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012984 | PROCT domain | Domain | |
IPR012591 | PRO8NT domain | Domain | |
IPR019580 | Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding | Domain | |
IPR027652 | Pre-mRNA-processing-splicing factor 8 | Family | |
IPR043172 | Prp8 RNase domain IV, palm region | Homologous Superfamily | |
IPR012592 | PROCN domain | Domain | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily | |
IPR043173 | Prp8 RNase domain IV, fingers region | Homologous Superfamily | |
IPR021983 | PRP8 domain IV core | Domain | |
IPR019581 | Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding | Domain | |
IPR037518 | MPN domain | Domain | |
IPR019582 | RNA recognition motif, spliceosomal PrP8 | Domain | |
IPR042516 | Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain superfamily | Homologous Superfamily | |
IPR000555 | JAB1/MPN/MOV34 metalloenzyme domain | Domain |