2NXJ
T.thermophilus ribosomal protein L11 methyltransferase (PrmA) in space group P 21 21 2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2nxja1 | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | Ribosomal protein L11 methyltransferase PrmA | PrmA-like protein TTHA0656 (TT0836) | (Thermus thermophilus HB8 ) [TaxId: 300852 ], | SCOPe (2.08) |
B | d2nxjb1 | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | Ribosomal protein L11 methyltransferase PrmA | PrmA-like protein TTHA0656 (TT0836) | (Thermus thermophilus HB8 ) [TaxId: 300852 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8041051 | 3000118 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8041051 | 3000118 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e2nxjA2 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain (From Topology) | T: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF06325 | e2nxjA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF06325 | ECOD (1.6) |
B | F_UNCLASSIFIED | e2nxjB2 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain (From Topology) | T: Ribosomal protein L11 methyltransferase PrmA N-terminal ferredoxin-like domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF06325 | e2nxjB3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF06325 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1170 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Sun protein | CATH (4.3.0) |
A | 1.20.5.1350 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
B | 3.30.70.1170 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Sun protein | CATH (4.3.0) |
B | 1.20.5.1350 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06325 | Ribosomal protein L11 methyltransferase (PrmA) (PrmA) | Ribosomal protein L11 methyltransferase (PrmA) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Ribosomal protein L11 methyltransferase |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050078 | Ribosomal protein L11 methyltransferase PrmA | Family | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR004498 | Ribosomal protein L11 methyltransferase | Family |