2MXD
Solution structure of VPg of porcine sapovirus
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.260.110 | Mainly Alpha | Orthogonal Bundle | 434 Repressor (Amino-terminal Domain) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20915 | Viral genome-linked protein (VPg) | Viral genome-linked protein | This family represents Viral genome-linked protein (VPg) from Caliciviruses such as Feline calicivirus (FCV). VPg plays a key role in translation initiation from genomic and subgenomic RNAs and is thought to function as a cap substitute for ribosomal ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001205 | RNA-directed RNA polymerase, C-terminal domain | Domain | |
IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily | |
IPR014759 | Helicase, superfamily 3, single-stranded RNA virus | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR000317 | Peptidase C24, Calicivirus polyprotein Orf1 | Domain | |
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR004005 | Calicivirus coat protein | Domain | |
IPR004004 | Helicase/polymerase/peptidase polyprotein, Calicivirus-type | Family | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily | |
IPR033703 | Picornavirus/Calicivirus coat protein | Domain | |
IPR007094 | RNA-directed RNA polymerase, catalytic domain | Domain | |
IPR049434 | VPg | Domain | |
IPR000605 | Helicase, superfamily 3, single-stranded DNA/RNA virus | Domain |