2MF6
Solution NMR structure of Chimeric Avidin, ChiAVD(I117Y), in the biotin bound form
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01382 | e2mf6A1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: PF01382 | ECOD (1.6) |
B [auth D] | PF01382 | e2mf6D1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: PF01382 | ECOD (1.6) |
C [auth B] | PF01382 | e2mf6B1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: PF01382 | ECOD (1.6) |
D [auth C] | PF01382 | e2mf6C1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Avidin/Streptavidin (From Topology) | T: Avidin/Streptavidin | F: PF01382 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
B [auth D] | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
C [auth B] | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
D [auth C] | 2.40.128.30 | Mainly Beta | Beta Barrel | Lipocalin | Avidin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth D], C [auth B], D [auth C] | PF01382 | Avidin family (Avidin) | Avidin family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth D], C [auth B], D [auth C] | IPR017889 | Avidin-like, conserved site | Conserved Site |
A, B [auth D], C [auth B], D [auth C] | IPR036896 | Avidin-like superfamily | Homologous Superfamily |
A, B [auth D], C [auth B], D [auth C] | IPR051764 | Avidin/Streptavidin-related | Family |
A, B [auth D], C [auth B], D [auth C] | IPR005468 | Avidin/streptavidin | Family |
A, B [auth D], C [auth B], D [auth C] | IPR005469 | Avidin | Family |
A, B [auth D], C [auth B], D [auth C] | IPR017889 | Avidin-like, conserved site | Conserved Site |
A, B [auth D], C [auth B], D [auth C] | IPR036896 | Avidin-like superfamily | Homologous Superfamily |
A, B [auth D], C [auth B], D [auth C] | IPR051764 | Avidin/Streptavidin-related | Family |
A, B [auth D], C [auth B], D [auth C] | IPR005468 | Avidin/streptavidin | Family |
A, B [auth D], C [auth B], D [auth C] | IPR005469 | Avidin | Family |