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2LT3
Solution NMR structure of the C-terminal domain of CdnL from Myxococcus xanthus
External Resource: Annotation
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
CdnL
e2lt3A1
A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: CdnL
ECOD (1.6)
Domain Annotation: CATH
CATH Database Homepage
Chain
Domain
Class
Architecture
Topology
Homology
Provenance Source (Version)
A
1.20.58.1290
Mainly Alpha
Up-down Bundle
Methane Monooxygenase Hydroxylase
Chain G, domain 1
CATH (4.3.0)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF21095
CarD, C-terminal domain (CarD_C)
CarD, C-terminal domain
This entry represents the C-terminal helical domain of CarD from Mycobacterium tuberculosis, a RNAP-binding protein that regulates transcription and essential processes [1-3]. This domain binds DNA in a non-specific manner [4].
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Transcriptional regulator, CarD family
-
cellular biosynthetic process
cellular metabolic process
RNA metabolic process
primary metabolic process
nucleobase-containing compound biosynthetic process
gene expression
macromolecule biosynthetic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
RNA biosynthetic process
DNA-templated transcription
nucleic acid biosynthetic process
biosynthetic process
rRNA transcription
cellular biosynthetic process
cellular metabolic process
RNA metabolic process
primary metabolic process
nucleobase-containing compound biosynthetic process
gene expression
macromolecule biosynthetic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
RNA biosynthetic process
DNA-templated transcription
nucleic acid biosynthetic process
biosynthetic process
rRNA transcription
metabolic process
cellular process
macromolecule metabolic process
rRNA metabolic process
Less
-
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR042215
CarD-like, C-terminal domain
Homologous Superfamily
A
IPR048792
CarD, C-terminal domain
Domain
A
IPR052531
CarD-like transcription regulator
Family
A
IPR036101
CarD-like/TRCF, RNAP-interacting domain superfamily
Homologous Superfamily
A
IPR003711
CarD-like/TRCF, RNAP-interacting domain
Domain
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