2KZ3

Backbone 1H, 13C, and 15N Chemical Shift Assignments for human Rad51D from 1 to 83

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Rad51 N-terminal domain-like	8018178	4001033	SCOP2 (2021-05-27)
A	SCOP2 Superfamily	Helix-hairpin-helix tandem	8056646	3000163	SCOP2 (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF21794	e2kz3A1	A: alpha arrays	X: HhH/H2TH	H: SAM/DNA-glycosylase	T: SAM domain-like	F: PF21794	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF21794	RAD51D, N-terminal domain (RAD51D_N)	RAD51D, N-terminal domain	RAD51D plays an important role in DNA repair by homologous recombination (HR) and together with other RAD51 paralogues, RAD51B, RAD51C, XRCC3 and XRCC2, helps recruiting RAD51 to the break site [1-3]. This entry represents the N-terminal domain which ...	RAD51D plays an important role in DNA repair by homologous recombination (HR) and together with other RAD51 paralogues, RAD51B, RAD51C, XRCC3 and XRCC2, helps recruiting RAD51 to the break site [1-3]. This entry represents the N-terminal domain which is essential for protein-protein interaction with XRCC2 and consists of four short helices flanked by long N- and C-terminal tails [1]. This domain can bind DNA, preferentially ssDNA [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Putative uncharacterized protein RAD51L3	ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity ATP-dependent activity DNA damage sensor activity small molecule sensor activity ATP-dependent DNA damage sensor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity ATP-dependent activity DNA damage sensor activity small molecule sensor activity ATP-dependent DNA damage sensor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding cytoskeletal protein binding protein binding gamma-tubulin binding tubulin binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides DNA secondary structure binding four-way junction DNA binding single-stranded DNA binding	homologous recombination sexual reproduction reproductive process meiotic cell cycle process nucleobase-containing compound metabolic process cellular component organization meiosis I meiotic nuclear division cell cycle cellular component organization or biogenesis reciprocal homologous recombination cell cycle process DNA recombination meiotic cell cycle homologous recombination sexual reproduction reproductive process meiotic cell cycle process nucleobase-containing compound metabolic process cellular component organization meiosis I meiotic nuclear division cell cycle cellular component organization or biogenesis reciprocal homologous recombination cell cycle process DNA recombination meiotic cell cycle organelle fission primary metabolic process DNA metabolic process nucleic acid metabolic process reciprocal meiotic recombination nuclear division organelle organization meiosis I cell cycle process metabolic process cellular process macromolecule metabolic process mitotic recombination telomere organization chromosome organization telomere maintenance telomere maintenance via recombination cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress interstrand cross-link repair DNA repair DNA strand invasion double-strand break repair recombinational repair double-strand break repair via homologous recombination regulation of biological process regulation of cellular process biological regulation regulation of cell cycle	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus Rad51B-Rad51C-Rad51D-XRCC2 complex nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle organelle DNA recombinase mediator complex centrosome microtubule organizing center cytoskeleton membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus Rad51B-Rad51C-Rad51D-XRCC2 complex nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle organelle DNA recombinase mediator complex centrosome microtubule organizing center cytoskeleton intracellular non-membrane-bounded organelle microtubule cytoskeleton non-membrane-bounded organelle cytoplasm membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen replication fork chromosome chromosome, telomeric region chromosomal region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	Domain
A	IPR003593	AAA+ ATPase domain	Domain
A	IPR047323	DNA repair protein RAD51 homolog 4, C-terminal	Domain
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR016467	DNA recombination and repair protein, RecA-like	Family
A	IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	Domain
A	IPR048943	RAD51D, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.