2JXG
Solution Structure of the DNA Binding domain of Proline Utilization A (PutA)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2jxga_ | All alpha proteins | Ribbon-helix-helix | Ribbon-helix-helix | PutA pre-N-terminal region-like | automated matches | (Pseudomonas putida ) [TaxId: 303 ], | SCOPe (2.08) |
B | d2jxgb_ | All alpha proteins | Ribbon-helix-helix | Ribbon-helix-helix | PutA pre-N-terminal region-like | automated matches | (Pseudomonas putida ) [TaxId: 303 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.1220.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant | Met repressor-like | CATH (4.3.0) |
B | 1.10.1220.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant | Met repressor-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21775 | PutA, RHH domain (PutA_1st) | PutA, RHH domain | This domain is found in the Bifunctional protein PutA from Escherichia coli and similar sequences mainly found in proteobacteria. PutA is both a bifunctional proline catabolic enzyme that oxidises proline to glutamate for use as a carbon and nitrogen ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002872 | Proline dehydrogenase domain | Domain | |
IPR015590 | Aldehyde dehydrogenase domain | Domain | |
IPR048798 | PutA, RHH domain | Domain | |
IPR016161 | Aldehyde/histidinol dehydrogenase | Homologous Superfamily | |
IPR029041 | FAD-linked oxidoreductase-like | Homologous Superfamily | |
IPR016162 | Aldehyde dehydrogenase, N-terminal | Homologous Superfamily | |
IPR041349 | Proline utilization A proline dehydrogenase N-terminal domain | Domain | |
IPR010985 | Ribbon-helix-helix | Homologous Superfamily | |
IPR050485 | Proline metabolism enzyme | Family | |
IPR025703 | Bifunctional protein PutA | Family | |
IPR013321 | Arc-type ribbon-helix-helix | Homologous Superfamily | |
IPR024090 | Proline dehydrogenase PutA, domain I | Homologous Superfamily | |
IPR024089 | Proline dehydrogenase PutA, domain I/II | Homologous Superfamily | |
IPR016163 | Aldehyde dehydrogenase, C-terminal | Homologous Superfamily | |
IPR016160 | Aldehyde dehydrogenase, cysteine active site | Conserved Site | |
IPR005933 | Bifunctional protein PutA, C-terminal domain | Domain | |
IPR024082 | Proline dehydrogenase PutA, domain II | Domain |