Annotations: 2JSN

Solution structure of the atypical PDZ-like domain of synbindin

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	FXa_inhibition	e2jsnA1	A: alpha arrays	X: Lipocalins/Streptavidin	H: SAM/DNA-glycosylase	T: SAM domain-like	F: FXa_inhibition	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.42.40	Mainly Beta	Roll	Pdz3 Domain		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF04099	Sybindin-like family (Sybindin)	Sybindin-like family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Trafficking protein particle complex subunit 4	-	developmental process multicellular organismal process plasma membrane bounded cell projection organization cellular developmental process cell projection organization cell development neuron projection development nervous system development cellular component organization generation of neurons neurogenesis multicellular organism development neuron differentiation dendrite development cell differentiation developmental process multicellular organismal process plasma membrane bounded cell projection organization cellular developmental process cell projection organization cell development neuron projection development nervous system development cellular component organization generation of neurons neurogenesis multicellular organism development neuron differentiation dendrite development cell differentiation neuron development anatomical structure development cellular process cellular component organization or biogenesis animal gross anatomical part developmental process system development catabolic process autophagy metabolic process process utilizing autophagic mechanism vesicle budding from membrane cellular localization transport vesicle-mediated transport vesicle organization cellular component biogenesis localization cellular component assembly establishment of localization in cell protein-containing complex assembly membrane organization protein-containing complex organization intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization organelle organization COPII vesicle coat assembly COPII-coated vesicle budding Golgi vesicle transport vesicle coat assembly	postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic membrane asymmetric synapse plasma membrane region membrane-bounded organelle intracellular anatomical structure Golgi apparatus subcompartment Golgi apparatus organelle subcompartment intracellular membrane-bounded organelle endomembrane system intracellular organelle Golgi stack cytoplasm presynapse presynaptic active zone protein-containing complex intracellular protein-containing complex TRAPP complex vesicle tethering complex vesicle Golgi membrane bounding membrane of organelle organelle membrane endosome intracellular vesicle TRAPPII protein complex cytoplasmic vesicle TRAPPIII protein complex cytosol somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection transport vesicle synaptic vesicle secretory vesicle exocytic vesicle endoplasmic reticulum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR007233	Trafficking protein particle complex subunit	Family
A	IPR011012	Longin-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: Q9Y296	heart disease lymphoplasmacytic lymphoma plasma cell myeloma large cell medulloblastoma osteosarcoma lung carcinoma ovarian cancer