2JPQ

Solution NMR structure of homodimer VP2129 from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium target VpR61.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2jpqa1	All alpha proteins	YejL-like	YejL-like	YejL-like	Hypothetical protein VP2129	(Vibrio parahaemolyticus ) [TaxId: 670 ],	SCOPe (2.08)
A	d2jpqa2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Vibrio parahaemolyticus ) [TaxId: 670 ],	SCOPe (2.08)
B	d2jpqb2	All alpha proteins	YejL-like	YejL-like	YejL-like	Hypothetical protein VP2129	(Vibrio parahaemolyticus ) [TaxId: 670 ],	SCOPe (2.08)
B	d2jpqb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Vibrio parahaemolyticus ) [TaxId: 670 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YejL-like	8022341	4001507	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YejL-like	8034721	3001731	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	YejL-like	8034721	3001731	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1414	e2jpqA1	A: alpha duplicates or obligate multimers	X: YejL-like	H: YejL-like (From Topology)	T: YejL-like	F: DUF1414	ECOD (1.6)
B	DUF1414	e2jpqB1	A: alpha duplicates or obligate multimers	X: YejL-like	H: YejL-like (From Topology)	T: YejL-like	F: DUF1414	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.3390.10	Mainly Alpha	Orthogonal Bundle	YejL-like	YejL-like	CATH (4.3.0)
B	1.10.3390.10	Mainly Alpha	Orthogonal Bundle	YejL-like	YejL-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF07208	Protein of unknown function (DUF1414) (DUF1414)	Protein of unknown function (DUF1414)	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR009857	Uncharacterised protein family UPF0352	Family
A, B	IPR023202	YejL-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.