2HSM
Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d2hsmb_ | All alpha proteins | GST C-terminal domain-like | GST C-terminal domain-like | Arc1p N-terminal domain-like | GU4 nucleic-binding protein 1, Arc1p | baker's yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Thioredoxin-like | 8089972 | 3000031 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | GST C-terminal domain-like | 8089973 | 3000305 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | GST C-terminal domain-like | 8034258 | 3000305 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e2hsmA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Glutathione S-transferase (GST)-C (From Topology) | T: Glutathione S-transferase (GST)-C | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF18466 | e2hsmA2 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: PF18466 | ECOD (1.6) |
B | PF21972 | e2hsmB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Glutathione S-transferase (GST)-C (From Topology) | T: Glutathione S-transferase (GST)-C | F: PF21972 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.30.70 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | CATH (4.3.0) | |
A | 1.20.1050.10 | Mainly Alpha | Up-down Bundle | Glutathione S-transferase Yfyf (Class Pi) | Chain A, domain 2 | CATH (4.3.0) |
B | 1.20.1050.10 | Mainly Alpha | Up-down Bundle | Glutathione S-transferase Yfyf (Class Pi) | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21972 | Nuclear-export cofactor Arc1p (Arc1p_N_like) | Nuclear-export cofactor Arc1p | This is the N-terminal domain of nuclear-export cofactor Arc1p (Arc1p-N). Arc1p-N and GluRS-N are known to be necessary and sufficient for formation of the yeast aaRS complex in vivo and in vitro. They are likely to form a stable complex with each ot ... | Domain |