2HQ9
Crystal structure of a fad-binding protein (mll6688) from mesorhizobium loti at 1.95 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2hq9a1 | All beta proteins | Split barrel-like | FMN-binding split barrel | PNP-oxidase like | Hypothetical protein Mll6688 | (Mesorhizobium loti ) [TaxId: 381 ], | SCOPe (2.08) |
A | d2hq9a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Mesorhizobium loti ) [TaxId: 381 ], | SCOPe (2.08) |
B | d2hq9b_ | All beta proteins | Split barrel-like | FMN-binding split barrel | PNP-oxidase like | Hypothetical protein Mll6688 | (Mesorhizobium loti ) [TaxId: 381 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | PNP-oxidase like | 8030007 | 4002129 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | FMN-binding split barrel | 8042386 | 3000856 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | FMN-binding split barrel | 8042386 | 3000856 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pyridox_ox_2 | e2hq9A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Pyridox_ox_2 | ECOD (1.6) |
B | Pyridox_ox_2 | e2hq9B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Pyridox_ox_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.110.10 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
B | 2.30.110.10 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12900 | Pyridoxamine 5'-phosphate oxidase (Pyridox_ox_2) | Pyridoxamine 5'-phosphate oxidase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Mll6688 protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012349 | FMN-binding split barrel | Homologous Superfamily | |
IPR024747 | Pyridoxamine 5'-phosphate oxidase-related | Family |