REFINED SOLUTION STRUCTURE OF THE TYR 41--> HIS MUTANT OF THE M13 GENE V PROTEIN. A COMPARISON WITH THE CRYSTAL STRUCTURE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2gvbb_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Phage ssDNA-binding proteins | Gene V protein | (Inovirus M13 ) [TaxId: 1977402 ], | SCOPe (2.08) |
| A | d2gvba_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Phage ssDNA-binding proteins | Gene V protein | (Inovirus M13 ) [TaxId: 1977402 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Stap_Strp_toxin | e2gvbB1 | A: beta barrels | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Stap_Strp_toxin | ECOD (v294.2) |
| A | Stap_Strp_toxin | e2gvbA1 | A: beta barrels | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Stap_Strp_toxin | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
| A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02303 | Helix-destabilising protein (Phage_DNA_bind) | Helix-destabilising protein | This family contains the bacteriophage helix-destabilising protein, or single-stranded DNA binding protein, required for DNA synthesis. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
| IPR003512 | Bacteriophage M13, G5P, DNA-binding | Family |














